The peroxidase database
Entry information :
Entry ID 1025
Creation 2006-07-17 (Filippo Passardi)
Last sequence changes 2006-07-17 (Filippo Passardi)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-29 (Qiang Li)
Peroxidase information
Name OsPrx15
Class Class III peroxidase    [Orthogroup: Prx048]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons External Link
Organism Oryza sativa ssp japonica cv Nipponbare    [TaxId: 39947]
Cellular localisation N/D
Tissue types Callus
Leaves
Pannicles
Shoots
Inducers Fungus infection
Pathogen interaction
Repressor N/D
Best BLASTp hits
Perox score E-value OsPrx15
start..stop
S start..stop
OsiPrx15 618 0 1..353 1..349
BdiPrx66 521 0 1..353 1..355
HvPrx12 508 0 1..325 1..328
TmPrx08 506 0 1..351 1..354
Gene structure Fichier Exons +
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 12547235..12547459 225 N° 2 12551299..12551712 414 N° 3 12552134..12552556 423  
join(12547235..12547459,12551299..12551712,12552134..12552556)


exon

Literature and cross-references
Literature Passardi F., Longet, D., Penel C. and Dunand, C. The class III peroxidase multigenic family in rice and its evolution in land plants Phytochemistry, 65 (13), 1879-1893 (2004)
Protein ref. UniProtKB: Q5U1S8 Q654R2 [Different splicing] A2ZSJ2 [Incorrect splicing]
DNA ref. GenBank: NC_008394.1 (12547235..12552553)
Cluster/Prediction ref. TGI: TC295622 UniGene: Os.20260
Protein sequence
Sequence Properties
first value : protein
second value (mature protein)
Length (aa) %sProtein length in amino acid 353 (334)
PWM (Da) %sMolecular Weight of protein
Protein Mw is calculated by the addition of average isotopic masses
of amino acids in the protein and the average isotopic mass of one water molecule.
Molecular weight values are given in Dalton (Da).
37037.72 (35135.7) Transmb domain %sTransmembrane domain
Calculation done with TMHMM
The topology is given as the position of the transmembrane helices
separated by i if the loop is on the inside or o if it is on the outside.
For example i7-29o44-66i87-109o means that it starts on the inside,
has a predicted TMH at position 7 to 29, the outside, then a TMH at position 44-66 etc.
i7-26o
PI (pH) %sIso electric point of protein
Calculation done with EMBOSS parameters.
Please see Dataset for pKi calculation for more information
6.35 (6.02) Peptide Signal %sProtein signal for mature protein.
if exist :cut position of signal peptide.
range: start-end pos of mature protein
cut: 20 range:20-353
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASCSKWLAGLMLLAAALACSLPAASRAQLQVGFYNTSCPTAEALVRQAVVAAVANNSGLAAGLIRLHFHDCFVRGCDASVLIFSPNGTAERDAAPNNPSLRGFEVIDAAKAAVEAACPRTVSCADILAFAARDSVNLTGNSFYQVPAGRRDGNVSIDTDAFTLPGPNLTATQLVDGFKLRNLTAEEMVILSGSHTIGRSHCASFLFKNRERLANGTISPAYQALLEALCPPTTGRFTPITTEIDVSTPATLDNNYYKLLPLNLGLHFSDDQLIRNATLLPFVDAFAANETLWKEKFVAAMIKMGNIDVLTGARGEIRLNCSAVNPSSSSSSSSAGRMIETVFPGAGGEVAAS*


Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, introns 1 and 3'), 5 mRNA and 25 ESTs. Containing IntR (3').
DNA +
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGAGCTGCAGCAAGTGGCTGGCCGGGCTGATGCTGCTGGCGGCGGCGCTGGCGTGCTCGCTGCCGGCGGCGAGCCGGGCGCAGCTGCAGGTGGGGTTCTACAACACGAGCTGCCCC
ACCGCCGAGGCGCTGGTCCGGCAGGCCGTCGTGGCCGCCGTCGCCAACAACTCCGGCCTCGCCGCCGGCCTCATCCGCCTCCATTTCCACGACTGCTTCGTCAGG
GTTCGTCTCTCTCCA
ACTCGTACATGTAAAATAAAGCTGCAGCTTGCTTAGTTAATTAACAGCAACTAAACCTTAATTTGCTTTGAACTGATAATTAGGACGAAAAGGTTTACAGTAAAGAAAACTGCAGGGAAT
TAACTTTTATTAGCTTTGATATAAAAAGGAACGGAAACATACATATATGCATGCTTGTTTACATCCCCTTTTTTCCAACCCATCTCCCTCGTTTTCCACACGCACGCTTTTTAAACTGCT
AAACAGTACATATTTTTTAAAAAGTTTCTATACGAAAGTTGCTTTAAAAAATTAAATTAATCTATTTTTGAAAAAAAATTAGCAGATACTTAATTAATCACGTGCTAATGGACCGCTCCG
TGTTTCCGTGTTTATTACATAGCTTCTATTCTGGTCGATCATCTGTACCTAAATTGATGCATCCTTGGTCGATGGAGTTAGGTAGCAGTCCATATGTAGTATTCCCTCTGTTTTCTTTGT
GTTTGTTCTGAGTTAGATTTATTTAAGTTCAACTAAGTTCATAAGAAAAAAAATACAGTAACACTGAAAATGCTAAATTAGTTTTATTAAATTTATTATTTAATATATATTTTAATAGTT
TGCTTGTCATGTGTTAAAAATAATACTATTACATTTTTTCATGAACTTAATTTGGTCAAGCTTAAAAGAAGACTGACTTAGCACGGACTTATAAGACGGTTTATAATATAAAATGAAAGG
ATGCTCATTGGTCATAATAAAACAGATTTGTTATATAGATGTTGGAAGAGAGGATTTTTCCTAAAAATTAACAAGAAAGAGAAGGACAAATCTAGCTACTCGCCTCGAAGGGGCGGCAGC
CGCCAGTTAGGGTGTGTTTGGTTGGGTGGATGAGTTCTGGATGGGAGATGGCAGCCCGATTTTTTGTGGTGTTTGATTGGAGAGAAGGGTGGATGGGGCAGCCTGAAATAGGGAATATTC
CCTCAATGTGCTGGATGAGTGCGATTTGGCTGGATGAAGCCATTCAATTTTGGTATGGGTGACGTGTCCTATTCTGATTGGTTGTGGTTTGTTTGATTTTCTGTTAAGCAAGCTCCAAAT
GATTTTTTTCTCCCAAATCGTTTACCTAATTTATGATTTGATTACATCATTACATTTGTTACAATTATATCTTTAAAATAAGATGTCGGATGATTATATTTTGATAAAAATATATATAAC
AAATGGGTCCCACTAACTTTTGTCTTTTCTCATACATGCTATATCCCTCCAACCAAATAAGAAATTGGATCGCCATATACATACGAACCAAACAAAAAATTGGATCACCATATCCAACAA
AATATAGATGGTCATATCCTATCCATGTATGATCCTGAACCAAACACACCCTTATACACTGCACCGTAGAAAAAAAATCCATAAATCAGTTTTATTAATTGCATCAAAAAATAATTGTTA
CCTAATCAATGTGAACCGCCGGAGAATGTACGGTGACAATTCGTTTGAACGGTAGCAAGGATACTCGTATGAAGATCGATGCTTTGGGAAGCCCAAGTGTGTGTTGTACACGATTTCTGG
ATTTCAAGATACATAGACCTTTCATGGAAGCAGTATGAATGCTGCCAGTTGGACAGTGATAGATCGATTATATTTCTCCATTTTGAAAAAGAGATTGTAGATTCCGAATATCCATTTTTG
TATCAAAGAGTACTAGCTAATTGTACCAGAATTACTTGAAAATAATGTTTGTCCTAGGTCGATGGTGATTGCTCGGCCATTCTAGCTAATCAAACAGGTGAAAATATGTGGTTGAAATCA
CATGCTAGCTTAACTTGCTGGAACCTTGAAATATTTTTCATTTAAAAGTTCTAAGAAATAAAAAACAATTTCCCATATGTAGGGAGGTTGATACGTATTGTGAGACAATCATAGAAAGTT
TCGAGACCAAAGTCTACTTTGCTTGTGACATAGTTAGCAAAAACGAGATGTTTCAAGAAAAAACAAATGGTAAAGAAAGAAAAATTACGGTTCTTAACATAATACTTTAAGGTACTTCAA
TTTTGTACGAATTAAAAATGATACCACGAGGTACTAATACTTTGAGGTACCATTTTGCACCAGAAAACATATGATACCTCCCTATACTTTTTGAAGAATGATAATATTATTCACAATGGA
AAATATAAATTTCTAGTTTTTATCTCTTTTTTTTTGTCGTCTGCCAGTTTCATATTAAAAAATGAAGTTAAGTTCCAGCTTAAAAAAAAAGGAATATGGAGTTAAGTTTCCTCTTGAAAG
GTTGGTAATATATGTGAAATATGGTTTCGAGAACATTTTAGAGACTGGTTTAATTTCTTGGCTGTTCCAAACTAGATAGTGATTACCGCCGTACACAGTTACAAATTTACACATCACAGA
CACATAACATAGGCCTAATCAACAGCTATCTAATTAATTTAGCAGTGATGTTGTACCTTTAGATGCTGTGCATATGATATGCCGAGTTCGCAAACATGATATGTCAAGGTCTTCTTCAAC
TTGTATGGCATACTTCCTCCATCCCATGAAAACCAATATAGTACTAGATGTGATACTCTTAGTATTATGAATTTGGACATATCTCTGTCCAGATTCATTGTATTATAATATGTCACATCC
AATCATAGATTTATTTTTTTAGACGGAGGGACGATTTTGCTATATATTTGTCGATAAATTTTTCCCTAAAAATTTGACAGATGTAATTACAGTACAATCGTAGTGTAATTTTGGGAAAAA
TTTGTCGACAAATGTATAGGTAGTCCCTATATTAATGTTTTTTACCTACTCATTTATAAGTGGTTTCACGGGTCTACTCACTTGCATCTGTGTATAGTACAAACAAATGGATAACCAACC
CATTTATTTGTATTATAAGTGATTTCACAGTTGATTTAATTCCACTTGCATACTTAGCCGGGACCCCGGGACCCTGCTACGTGCAAAGAGCACACGAATTGATGTTTCCCCGGTTTAATG
GGGTAGCTATAGATACATCAATATGTGAACGGATTAATTAATTGGATGGACGGCTGCTGTCGTACTTTGTTTGCTTATCTATATCTAGATTGACCAACATTTGAGGATCACGAGTACTTA
CTACGAACAATCAGACATGGTATATATTCGTTTATAACTTTGCATATAGAGATGGGGTAATACCATGCATACATATATGCCATTGATCACGTTGAGAAAGGAAGAAATATTTATCGGCCT
TAACTCAAAGCATGCGTTTGCCATCTTTCATCTAGATCTAATAATTCTATCTTCCAAGTCCCTAATTATGGATGGGAGATAGGGGATCTTCCATTTGCAAAAGAAAATCTTAACTACTAT
GCTGAGATGAAGGTGTAACAATATATTATAATTTATTACTAACTTAGCACTACTAGGGATGATTTGAGTTTTCCGTACTTACTATTATATCTGCGTCGAATATATAGACTCATGCATATA
CATGTAACATGTTAATCAGGAGTATTTACCTATCTTTTTAGACAATATGAAGGGCCTGTTCACTTTGATGCCAAAAAAAACCTTACCAAATTTTGACAATGCCAAAATTTTGGCATAGTT
ACCAAAATTTGACAGCAAACTAAATGTAGCTACTTTTTTAGCAACTTTACCAAAATTTGGTAAGATTGAAAATGGCATCAAAGTGAACATATCTGAAAGTTATATATATATAGTTATTCC
CATATTTATAGTTACTACCTTCAAAATCTTATTTTATTCATTTCCAAAAAACTCTTATTTAATTATTAATTTAAAAAAAGTTTATTTATGTCGTCATTGGTTAGGGGTGTGATGCATCAG
TGCTGATCTTCTCGCCGAACGGCACGGCGGAGCGCGACGCGGCGCCGAACAACCCCAGCCTCCGGGGTTTCGAGGTGATCGACGCCGCCAAGGCCGCCGTCGAGGCGGCGTGCCCGCGCA
CCGTCTCCTGCGCCGACATCCTCGCCTTCGCCGCCCGCGACAGCGTCAACCTCACCGGCAACTCCTTCTACCAGGTCCCCGCCGGCCGCCGCGACGGCAACGTCTCCATCGACACCGACG
CCTTCACGCTCCCCGGGCCAAACCTCACGGCGACGCAGCTCGTCGACGGCTTCAAGCTCAGGAACCTGACCGCCGAGGAGATGGTCATCCTCTCCGGCTCCCACACCATCGGCCGCTCGC
ACTGCGCCTCCTTCCTCTTCAAGAACCGTGAACGTTTG
GTACGTGAGAAAAGAAAACTTCTGCATTAAATGATTGCCCTTGTTTTTCATGACGCCAAAACGATTATTATTTTTTAGAAGA
CTAATAATATAGTATATAACACTTTATGAGCATACAGTTTAAATTTAATCAATAGACTAAAAGCAAGTTATAACTATTTAAGATGATATGATATACCCTCCGAAAAAAAATCAAACCCTC
TGTGTCCAGATTTATCTATAGGGTTTATTTCTTTTAGGACGGAGGGAGTACGCAAGAAAATATATATATATATATATATATATATATATATATATATATAGACACACATACATACATACA
TATACATATATATATATATATATATATATATACACACACATACATACATACATATCTCTACTGATAGTATACGTGTGGTGATGATTTTTCCCGGTGTAGGCGAATGGGACGATTAGCCCG
GCGTACCAGGCGCTGCTGGAGGCGCTGTGCCCGCCGACGACGGGGCGGTTCACGCCGATCACGACGGAGATCGACGTGAGCACGCCGGCGACGCTGGACAACAACTACTACAAGCTGCTG
CCGCTCAACCTGGGCCTCCACTTCTCCGACGACCAGCTCATCCGCAACGCCACGCTCCTCCCCTTCGTCGACGCCTTCGCCGCCAACGAGACGCTGTGGAAGGAGAAGTTCGTCGCCGCC
ATGATCAAGATGGGCAACATCGACGTGCTCACCGGCGCCCGGGGGGAGATCCGGCTCAACTGCAGCGCCGTCAACCCGTCCTCGTCGTCGTCGTCGTCCTCCGCCGGGAGGATGATCGAG
ACCGTCTTCCCCGGCGCCGGCGGTGAGGTCGCCGCGAGCTAA
Retrieve as FASTA  
CDS +
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGAGCTGCAGCAAGTGGCTGGCCGGGCTGATGCTGCTGGCGGCGGCGCTGGCGTGCTCGCTGCCGGCGGCGAGCCGGGCGCAGCTGCAGGTGGGGTTCTACAACACGAGCTGCCCC
ACCGCCGAGGCGCTGGTCCGGCAGGCCGTCGTGGCCGCCGTCGCCAACAACTCCGGCCTCGCCGCCGGCCTCATCCGCCTCCATTTCCACGACTGCTTCGTCAGG
GGGTGTGATGCATCA
GTGCTGATCTTCTCGCCGAACGGCACGGCGGAGCGCGACGCGGCGCCGAACAACCCCAGCCTCCGGGGTTTCGAGGTGATCGACGCCGCCAAGGCCGCCGTCGAGGCGGCGTGCCCGCGC
ACCGTCTCCTGCGCCGACATCCTCGCCTTCGCCGCCCGCGACAGCGTCAACCTCACCGGCAACTCCTTCTACCAGGTCCCCGCCGGCCGCCGCGACGGCAACGTCTCCATCGACACCGAC
GCCTTCACGCTCCCCGGGCCAAACCTCACGGCGACGCAGCTCGTCGACGGCTTCAAGCTCAGGAACCTGACCGCCGAGGAGATGGTCATCCTCTCCGGCTCCCACACCATCGGCCGCTCG
CACTGCGCCTCCTTCCTCTTCAAGAACCGTGAACGTTTG
GCGAATGGGACGATTAGCCCGGCGTACCAGGCGCTGCTGGAGGCGCTGTGCCCGCCGACGACGGGGCGGTTCACGCCGATC
ACGACGGAGATCGACGTGAGCACGCCGGCGACGCTGGACAACAACTACTACAAGCTGCTGCCGCTCAACCTGGGCCTCCACTTCTCCGACGACCAGCTCATCCGCAACGCCACGCTCCTC
CCCTTCGTCGACGCCTTCGCCGCCAACGAGACGCTGTGGAAGGAGAAGTTCGTCGCCGCCATGATCAAGATGGGCAACATCGACGTGCTCACCGGCGCCCGGGGGGAGATCCGGCTCAAC
TGCAGCGCCGTCAACCCGTCCTCGTCGTCGTCGTCGTCCTCCGCCGGGAGGATGATCGAGACCGTCTTCCCCGGCGCCGGCGGTGAGGTCGCCGCGAGCTAA
Retrieve as FASTA  
 

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