The peroxidase database
Entry information :
Entry ID 1523
Creation 2005-06-23 (Christophe Dunand)
Last sequence changes 2005-06-23
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2005-06-23
Peroxidase information
Name HvPrx10
Class Class III peroxidase    [Orthogroup: Prx073]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Hordeum External Link
Organism Hordeum vulgare (barley)    [TaxId: 4513]
Cellular localisation N/D
Tissue types Apex
Embryos
Embryosac
Seedling shoots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HvPrx10
start..stop
S start..stop
BdiPrx62 529 0 26..330 24..330
TaPrx31 495 1e-178 1..273 1..270
SbPrx60 475 8e-170 8..330 17..341
ZmPrx01_lineC 466 2e-166 20..330 26..339
Literature and cross-references
Literature Radchuk,V. et al., unpublished
Protein sequence
Sequence Properties
first value : protein
second value (mature protein)
Length (aa) %sProtein length in amino acid330
PWM (Da) %sMolecular Weight of protein
Protein Mw is calculated by the addition of average isotopic masses
of amino acids in the protein and the average isotopic mass of one water molecule.
Molecular weight values are given in Dalton (Da).
35043.01 Transmb domain %sTransmembrane domain
Calculation done with TMHMM
The topology is given as the position of the transmembrane helices
separated by i if the loop is on the inside or o if it is on the outside.
For example i7-29o44-66i87-109o means that it starts on the inside,
has a predicted TMH at position 7 to 29, the outside, then a TMH at position 44-66 etc.
i7-29o
PI (ph)%sIso electric point of protein
Calculation done with EMBOSS parameters.
Please see Dataset for pKi calculation for more information
8.71
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MATQGSARLA LIAALSAVCL LPVLATAQLR VGFYQKTCPN AEALVRQAVA AAFTKDAGIA AGLIRLHFHD CFVRGCDASV LLATNPGGGR TERVAIPNNP SLRGFEVIDA AKAALERSCP  RTVSCADILA FAARDSITLT GNVVYPVPAG RRDGSVSIEQ EALDNLPPPT FTAQQLIDRF KNKTLTAEEM VLLSGAHTVG RSFCASFVNR IWNGNTPIVD AGLSPAYAAQ LRALCPSTTT  QTTPITAPMD PGSPNVLDNN YYKLLPRGMG LFFSDNQLRV DGNLNGLVNR FAANESLWKE RFAAAMVKMG RIQVQTGSCG QVRLNCNVVN 

Retrieve as FASTA  
Remarks TIGR database. Complete sequence from 6 partial cDNA.
 

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