The peroxidase database
Entry information :
Entry ID 1572
Creation 2005-07-19 (Christophe Dunand)
Last sequence changes 2005-07-19
Sequence status partial
Reviewer reviewer name not stored
Last annotation changes 2009-01-12 (Cyril Jourda)
Peroxidase information
Name HvPrx59
Class Class III peroxidase    [Orthogroup: Prx067]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Hordeum External Link
Organism Hordeum vulgare (barley)    [TaxId: 4513]
Cellular localisation N/D
Tissue types Callus
Coleoptiles
Flowers
Germinating seeds
Leaves
Male inflorescences
Pre-anthesis spikes
Roots
Shoots
Stems
Inducer Drought
Repressor N/D
Best BLASTp hits
Perox score E-value HvPrx59
start..stop
S start..stop
TaPrx115 646 0 22..341 21..340
BdiPrx84 593 0 23..341 24..342
PedPrx02 575 0 21..340 23..342
PedPrx01 572 0 22..340 24..342
Literature and cross-references
Literature Zhang,H. et al., unpublished
mRNA ref. GenBank: AK248368
Cluster/Prediction ref. UniGene: Hv.22927
Protein sequence
Sequence Properties
first value : protein
second value (mature protein)
Length (aa) %sProtein length in amino acid 341 (318)
PWM (Da) %sMolecular Weight of protein
Protein Mw is calculated by the addition of average isotopic masses
of amino acids in the protein and the average isotopic mass of one water molecule.
Molecular weight values are given in Dalton (Da).
36951.92 (34682.7)
PI (pH) %sIso electric point of protein
Calculation done with EMBOSS parameters.
Please see Dataset for pKi calculation for more information
6.57 (6.70) Peptide Signal %sProtein signal for mature protein.
if exist :cut position of signal peptide.
range: start-end pos of mature protein
cut: 24 range:24-341
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MMRTVAAVAV AVLLAMAVAE AEAGELKVGY YDKSCRGVEN VVKWHVARAI KANRKNGAAL VRLIFHDCFV RGCDASVLLD PTPENPHTEK TAPINIGLAA FDLLDDIKSA VEDRCPGVVS  CADILIYAAR DAASLLSNGH VHFDALAGRL DGVHSHAAEA QQDLPDSTFT IAELIQNFKR KNFTIEELVI LSGAHAVGVG HCSSLRARLT APANQILPAY RGLLAGKCAK GPDPIVPNNI  RDEDAGDVAA AVPGFLPKLR KVKDFLDNSY YHNNLARIVT FNSDWQLLTE KEARGHVHEY ADNGTLWDED FSDSLVKLSK LPMPHGSEGE IRKQCRFVNH H 

Retrieve as FASTA  
Remarks TIGR database. Uncomplete sequence from 7 partial cDNA, and 27 EST, cultivar="Barke", "Optic", "Sloop", "Haruna Nijo", "Morex", "Ingrid BC mlo-5" and "Golden Promise"
 

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