The peroxidase database
Entry information :
Entry ID 1803
Creation 2007-09-12 (Christophe Dunand)
Last sequence changes 2007-09-12 (Christophe Dunand)
Sequence status complete
Reviewer Marcel Zamocky
Last annotation changes 2008-12-18 (Christophe Dunand)
Peroxidase information
Name (synonym) GhKat02 (cat2)
Class Catalase    [Orthogroup: Kat001]
Taxonomy Eukaryota Viridiplantae Streptophyta Malvaceae Gossypium External Link
Organism Gossypium hirsutum (upland cotton)    [TaxId: 3635]
Cellular localisation N/D
Tissue type Boll fibers (cotton)
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GhKat02
start..stop
S start..stop
PpeKat01 966 0 1..492 1..492
VvKat02 963 0 1..492 1..492
LuKat71 958 0 1..492 1..492
GhKat01 958 0 1..492 1..492
Literature and cross-references
Literature Ni,W.T. and Trelease,R.N. Two genes encode the two subunits of cottonseed catalase Arch. Biochem. Biophys. 289 (2), 237-243 (1991).
Protein ref. UniProtKB: P30567
mRNA ref. GenBank: X56675
Cluster/Prediction ref. UniGene: Ghi.16392
Protein sequence
Sequence Properties
first value : protein
second value (mature protein)
Length (aa) %sProtein length in amino acid492
PWM (Da) %sMolecular Weight of protein
Protein Mw is calculated by the addition of average isotopic masses
of amino acids in the protein and the average isotopic mass of one water molecule.
Molecular weight values are given in Dalton (Da).
56786.3
PI (ph)%sIso electric point of protein
Calculation done with EMBOSS parameters.
Please see Dataset for pKi calculation for more information
7.45
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MDPYKFRPSS SFDSPFWTTN SGAPVWNNNS SLTVGARGPI LLEDYHLVEK LANFDRERIP ERVVHARGAS AKGFFEVTHD ISQLTCADFL RAPGVQTPLI VRFSTVIHER GSPETLRDPR  GFAVKFYTRE GNFDLVGNNF PVFFIRDGMK FPDMVHALKP NPKSHIQENW RILDFFSHHP ESLHMFTFLF DDIGVPQDYR HMDGSGVHTY TLINKAGKSH YVKFHWKPTC GVKSLLEDEA  IRVGGANHSH ATQDLYDSIA AGNYPEWKLF IQIMDPLHED RFDFDPLDVT KTWPEDIFPL QPMGRMVLNK NIDNFFAENE QLAFCPSLIV PGIYYSDDKL LQTRIFSYSD TQRHRLGPNY  LQLPANAPKC AHHNNHHEGF MNFMHRDEEV NYFPSRYDPV RHAEKHPIPS TVLSGKREKC IIGKENNFKQ PGERYRSFSA DRQERFINRW IDALSDPRVT HEIRSIWISY WSQADKSLGQ  KIASRLNVRP SI 

Retrieve as FASTA  
Remarks Complete sequence from 1 and 11 ESTs. Cultivar="Coker 312".
 

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