The peroxidase database
Entry information :
Entry ID 2235
Creation 2007-02-08 (Christophe Dunand)
Last sequence changes 2007-02-08 (Christophe Dunand)
Sequence status complete
Reviewer Filippo Passardi
Last annotation changes 2007-02-21 (Filippo Passardi)
Peroxidase information
Name GhAPx02
Class Ascorbate peroxidase    [Orthogroup: APx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Malvaceae Gossypium External Link
Organism Gossypium hirsutum (upland cotton)    [TaxId: 3635]
Cellular localisation Cytosolic
Tissue types Boll fibers (cotton)
Embryos
Ovule
Roots
Stems
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GhAPx02
start..stop
S start..stop
GrAPx01 514 0 1..250 1..250
GrAPx02 485 5e-177 1..250 1..250
GrAPx03 483 3e-176 1..250 1..250
CpapAPx02 466 2e-169 1..250 1..249
Literature and cross-references
Literature Blewitt,M., Matz,E.C., Davy,D.F. and Burr,B.
ESTs from developing cotton fiber. Unpublished
Cluster/Prediction ref. UniGene: Ghi.8015
Protein sequence
Sequence Properties
first value : protein
second value (mature protein)
Length (aa) %sProtein length in amino acid250
PWM (Da) %sMolecular Weight of protein
Protein Mw is calculated by the addition of average isotopic masses
of amino acids in the protein and the average isotopic mass of one water molecule.
Molecular weight values are given in Dalton (Da).
27495.99
PI (ph)%sIso electric point of protein
Calculation done with EMBOSS parameters.
Please see Dataset for pKi calculation for more information
6.51
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTKCYPTVSE EYQKSVEKAK RKLRGLIAEK NCAPLMLRLA WHSAGTFDVK TKTGGPFGTM KHPAELAHAA NNGLDIAVRL LEPIKEQFPN LTYADFYQLA GVVAVEITGG PEIPFHPGRE  DKPHPPPEGR LPDATKGSDH LRQVFSAQMG LSDQHIVALS GGHTLGRCHK ERSGFEGPWT TNPLIFDNSY FKELLSGEKE GLLQLPTDKV LLSDPVFRPL VEKYAADEDA FFADYTEAHL  KLSELGFADA 

Retrieve as FASTA  
Remarks 3´incomplete. Sequence from 98 ESTs.
 

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