The peroxidase database
Entry information :
Entry ID 2509
Creation 2006-08-10 (Nenad Bakalovic)
Last sequence changes 2006-08-10 (Nenad Bakalovic)
Sequence status partial
Reviewer reviewer name not stored
Last annotation changes 2008-08-13 (Christophe Dunand)
Peroxidase information
Name AacAPx03
Class Ascorbate peroxidase    [Orthogroup: APx002]*
Taxonomy Eukaryota Viridiplantae Chlorophyta Ulvophyceae Polyphysaceae Acetabularia External Link
Organism Acetabularia acetabulum    [TaxId: 35845]
Cellular localisation Chloroplastic
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AacAPx03
start..stop
S start..stop
SsAPx04_AU1 314 7e-107 22..264 83..321
NtAPx02 301 2e-103 24..264 7..243
GbAPx04 305 3e-103 5..264 49..304
NhyAPx05 306 5e-103 22..264 123..361
Literature and cross-references
Literature Keeling,P.J.TBestDB [http://tbestdb.bcm.umontreal.ca/searches/login.php] Acetabularia acetabulum.
EST ref. GenBank: EC095316.1 EC096191.1|
Protein sequence
Sequence Properties
first value : protein
second value (mature protein)
Length (aa) %sProtein length in amino acid 263 (244)
PWM (Da) %sMolecular Weight of protein
Protein Mw is calculated by the addition of average isotopic masses
of amino acids in the protein and the average isotopic mass of one water molecule.
Molecular weight values are given in Dalton (Da).
29124.56 (26731.3)
PI (pH) %sIso electric point of protein
Calculation done with EMBOSS parameters.
Please see Dataset for pKi calculation for more information
5.39 (5.04) Peptide Signal %sProtein signal for mature protein.
if exist :cut position of signal peptide.
range: start-end pos of mature protein
cut: 20 range:20-263
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
YLFISRLYLL CFISWFSLKM YVDELKKAKE LVSALITEKN AYPIMIRLAW HDAGTYNKDI SEWPKCGGAN GSIRFEPEIK HGANAGLINA VNMLEEVHK* VPEVTYADLY QLASAVSVEL  AGGPKIPMKY GRVDTEECAP EGNLPDGNPP FHTGCKSAEQ HLRTIFHRMG LSNQDIVALS GAHTVGRAFK DRSGEGKEST KYTANLEGMT PGGSSWTKEF LKFDNSYFVE IKEQSDPELL  VLSTDAAIFT DPEFSPYAEK YLAD 

Retrieve as FASTA  
Remarks Partial sequence from 3 EST's. Stop codon in the sequence.
 

<< Back