The peroxidase database
Entry information :
Entry ID 254
Creation 2006-08-22 (Christophe Dunand)
Last sequence changes 2006-08-22
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-01-28 (Qiang Li)
Peroxidase information
Name (synonym) HvPrx07 (prx7)
Class Class III peroxidase    [Orthogroup: Prx050]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Hordeum External Link
Organism Hordeum vulgare (barley)    [TaxId: 4513]
Cellular localisation vacuole
Tissue types Coleoptiles
Embryosac
Epidermis
Leaves
Roots
Inducers Blumeria infection (Powdery mildew attack)
Pathogen interaction
Wounding
Repressor N/D
Best BLASTp hits
Perox score E-value HvPrx07
start..stop
S start..stop
TaPrx107 635 0 16..341 16..341
TaPrx30 498 3e-179 1..341 1..341
TmPrx10 491 2e-176 1..341 1..341
TaPrx48-1A 477 7e-171 26..341 26..339
Literature and cross-references
Literature Kristensen,B.K., Bloch,H. and Rasmussen,S.K. Barley coleoptile peroxidases. Purification, molecular cloning, and induction by pathogens Plant Physiol. 120 (2), 501-512 (1999).
Protein ref. UniProtKB: O49866
mRNA ref. GenBank: AJ003141
Cluster/Prediction ref. UniGene: Hv.37
Protein sequence
Sequence Properties
first value : protein
second value (mature protein)
Length (aa) %sProtein length in amino acid 341 (317)
PWM (Da) %sMolecular Weight of protein
Protein Mw is calculated by the addition of average isotopic masses
of amino acids in the protein and the average isotopic mass of one water molecule.
Molecular weight values are given in Dalton (Da).
36402.54 (34152.4)
PI (pH) %sIso electric point of protein
Calculation done with EMBOSS parameters.
Please see Dataset for pKi calculation for more information
6.5 (6.39) Peptide Signal %sProtein signal for mature protein.
if exist :cut position of signal peptide.
range: start-end pos of mature protein
cut: 25 range:25-341
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASRAAAAIA VLALVCAAVH SSEGQLSPNF HAATCPDLER IVEFHVAETF RRDVGVVPAL IRILFHDCFP QGCDASVLLK GAGSELNEIP NQTLRPVALD LIERIRVAVH RACGPTVSCA  DITVLATRDS LVKAGGPSFD VALGRRDGLA PASSALVGLL PVPFFDVPTL ISSFANRSLD VADLVSLSGA HTFGVAHCPA FEDRFKPVFD TNPAIDGKFA TALRNKCAGD NPAGTLTQNL  DVRTPDVFDN KYYFDLIARQ GLFKSDQGLI DHPTTKRMAT RFSLNQGAFF EQFARSMTKM SNMDILTGTK GEIRNNCAVP NRRVQDIETA VAGDEGIAAD M 

Retrieve as FASTA  
Remarks Complete sequence from 236 ESTs and 4 mRNA. Two independant TIGR compiles (TC166474 do not contains GGP and GRRD).
 

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