The peroxidase database
Entry information :
Entry ID 2869
Creation 2006-03-15 (Marcia Pinheiro Margis)
Last sequence changes 2011-04-15 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-04-15 (Christophe Dunand)
Peroxidase information
Name (synonym) NtGPx06-1A (NtGPx06a)
Class Plant glutathione peroxidase    [Orthogroup: Gpx2001]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana External Link
Organism Nicotiana tabacum    [TaxId: 4097]
Cellular localisation Cytosolic
Tissue type Cell culture
Inducers Elicitor treatment (glucan, oligosaccharides, yeast extract, Phytophthora crude extract)
Hormon treatment
Repressor N/D
Best BLASTp hits
Perox score E-value NtGPx06-1A
start..stop
S start..stop
NtGPx06-1B 457 1e-166 1..232 1..232
NsGPx06 347 3e-124 64..232 1..169
GhGPx06-1 343 2e-122 64..232 1..170
StGPx06 336 1e-119 64..232 1..169
Literature and cross-references
Literature Takemoto D., Kawakita K. Molecular cloning of elicitor inducible genes of tobacco. Submitted (APR-2000) to the EMBL/GenBank/DDBJ databases.
Protein ref. UniProtKB: Q9FXS3
mRNA ref. GenBank: AB041518
Protein sequence
Sequence Properties
first value : protein
second value (mature protein)
Length (aa) %sProtein length in amino acid232
PWM (Da) %sMolecular Weight of protein
Protein Mw is calculated by the addition of average isotopic masses
of amino acids in the protein and the average isotopic mass of one water molecule.
Molecular weight values are given in Dalton (Da).
25883.26
PI (ph)%sIso electric point of protein
Calculation done with EMBOSS parameters.
Please see Dataset for pKi calculation for more information
9.24
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MLYSATRVLI PRKNLSFLRQ FSLILKPTHF NSVSTPPIPT VISNSIVSAK RFELFCLRSD YSTMASQSSK PQSIYDFTVK DAKGNDVDLS IYKGKVLIIV NVASQCGLTN SNYTDMTEIY  KKYKDQGLEI LAFPCNQFGG QEPGSIEEIQ NMVCTRFKAE YPIFDKVDVN GDNAAPLYKF LKSSKGGFFG DSIKWNFSKF LVDKEGNVVD RYSPTTTPAS MEKDIKKLLG VA 

Retrieve as FASTA  
Remarks Complete sequence from 11 + 3 ESTs.
cDNA +
Send to BLAST
GAAGTTTAAG ATATTTGACC TTAGAAAGCA TCTTCTGAAA AATCTATAAA TTCATATACG CTAATGCTTT ATTCTGCAAC TCGTGTTCTC ATACCAAGAA AAAATCTCAG TTTCCTTAGG  CAATTTTCTT TGATTCTAAA ACCAACCCAT TTCAATTCTG TGTCTACTCC TCCGATTCCA ACAGTTATTT CCAATTCTAT TGTCTCCGCT AAGAGATTTG AGTTGTTTTG TTTAAGATCA  GATTATAGTA CCATGGCCAG CCAATCTAGC AAGCCTCAAT CTATTTATGA CTTCACTGTC AAGGATGCTA AGGGTAATGA TGTTGATCTC AGCATTTACA AGGGAAAGGT CCTTATCATT  GTCAATGTTG CATCACAGTG TGGCCTGACT AATTCAAACT ACACTGACAT GACCGAGATA TACAAGAAGT ACAAGGATCA AGGTCTGGAG ATTCTTGCAT TCCCTTGCAA CCAGTTCGGT  GGACAGGAGC CTGGAAGCAT TGAAGAGATC CAGAACATGG TTTGCACTCG CTTCAAGGCC GAGTACCCCA TATTTGATAA GGTTGATGTG AATGGTGATA ATGCTGCTCC ACTGTATAAG  TTCTTGAAAT CAAGCAAAGG TGGGTTCTTT GGGGATAGTA TCAAGTGGAA CTTCTCCAAA TTCCTTGTTG ACAAAGAAGG AAACGTCGTC GATCGCTACT CTCCAACCAC TACTCCAGCT  AGCATGGAGA AGGATATCAA GAAACTTTTG GGGGTTGCTT AAGCTCTGGA TTTGTCTGCA TCTGCATTCC TCTACTAGAA ATAATGACAG ACTACTATAG TGAATAAGTT GTATGTTGAT  GTAATTTGCT TCCTGTTTTG CCACTACTTT GGTCAGCTGC TTGTACAATT TCAATATTCA ATACATTTCC AGTGACAAGT AAAAAAAAAA AAAAAAAAAA AAAAAAAAAC ATGT 
Retrieve as FASTA  
 

<< Back