The peroxidase database
Entry information :
Entry ID 2993
Creation 2006-04-25 (Marcia Pinheiro Margis)
Last sequence changes 2011-04-26 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-04-26 (Christophe Dunand)
Peroxidase information
Name (synonym) NtGPx08-1B (NtGPx08b)
Class Plant glutathione peroxidase    [Orthogroup: Gpx2003]*
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana External Link
Organism Nicotiana tabacum    [TaxId: 4097]
Cellular localisation N/D
Tissue type N/D
Inducer Hormon treatment
Repressor N/D
Best BLASTp hits
Perox score E-value NtGPx08-1B
start..stop
S start..stop
NtGPx08-1A 308 5e-110 1..157 14..170
LeGPx08 288 4e-102 1..157 14..170
StGPx08 286 3e-101 1..157 14..170
PtGPx08 282 1e-99 1..156 14..169
Literature and cross-references
Literature Galis,I., Horiguchi,T. and Matsuoka,K. Profiling gene expression in tobacco BY-2 cells under different hormone conditions. Unpublished (2004)
EST ref. GenBank: BP530262.1
Protein sequence
Sequence Properties
first value : protein
second value (mature protein)
Length (aa) %sProtein length in amino acid157
PWM (Da) %sMolecular Weight of protein
Protein Mw is calculated by the addition of average isotopic masses
of amino acids in the protein and the average isotopic mass of one water molecule.
Molecular weight values are given in Dalton (Da).
17701.97
PI (ph)%sIso electric point of protein
Calculation done with EMBOSS parameters.
Please see Dataset for pKi calculation for more information
4.66
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
DFTVKDSKGN DIYLSSYKGK VLLIVNVASK CGVTNPNYAE LNQLYAKYKD QGLEILAFPC NQFGEEEPGS NDQILDFVCT RFKSEFPIFD KIEVNGENAS PLYKFLKSGK WGIFGDDIQW  NFAKFLVDKN GQAADRYYPT TSPLTIERDI IKLLEIV 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. 5' end is missing. cultivar="Bright Yellow No.2"
cDNA +
Send to BLAST
CCAGAATCTG TTTTTGACTT CACTGTAAAG GATTCAAAGG GAAATGATAT ATATCTTAGT AGCTACAAAG GAAAGGTCCT ACTTATCGTG AATGTTGCTT CAAAGTGCGG GGTGACTAAC  CCAAACTACG CAGAACTCAA CCAATTATAT GCGAAGTACA AAGATCAAGG CCTGGAAATA TTGGCATTTC CTTGCAATCA ATTTGGCGAG GAAGAACCAG GGAGCAATGA TCAGATCTTA  GACTTCGTTT GTACACGTTT CAAGTCAGAG TTCCCTATAT TTGACAAGAT TGAAGTGAAT GGTGAAAATG CATCTCCTCT TTATAAGTTC TTGAAATCGG GAAAGTGGGG AATATTTGGG  GATGATATTC AGTGGAATTT TGCTAAGTTC CTGGTTGATA AGAATGGACA GGCTGCTGAT CGCTATTATC CTACCACCTC TCCTCTGACA ATTGAGAGGG ATATAATAAA GCTGCTGGAA  ATTGTGTAGT TGCCAAGGTT GAGCCTTCAC CGATGGGTAT CAATTTTTGA CTTGTTAATG CTCTGGCTTG GTTTTGTTGT AGTAGTTTGT CCCTTATTTT CATTTGGTGA TCTGATAACA  GAACTTGTAT GTTCTTTTGG AGAAATTTAA ACCGACTTAT TTATTACCAA AAAAAAAGAA CAAACAAAAA AAA 
Retrieve as FASTA  
 

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