The peroxidase database
Entry information :
Entry ID 4123
Creation 2006-12-15 (Christophe Dunand)
Last sequence changes 2006-12-15 (Christophe Dunand)
Sequence status complete
Reviewer Filippo Passardi
Last annotation changes 2007-10-16 (Christophe Dunand)
Peroxidase information
Name EcabPGHS02
Class H synthase    [Orthogroup: PGHS001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Equidae Equus External Link
Organism Equus caballus    [TaxId: 9796]
Cellular localisation N/D
Tissue type Follicle
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcabPGHS02
start..stop
S start..stop
CfaPGHS02 1197 0 1..604 1..604
SscPGHS02 1159 0 12..604 12..604
OcuPGHS02 1156 0 15..604 15..604
MvPGHS02 1154 0 1..604 1..604
Literature and cross-references
Literature Boerboom D., Sirois J. Molecular characterization of equine prostaglandin G/H synthase-2 and regulation of its messenger ribonucleic acid in preovulatory follicles.
Endocrinology 139:1662-1670(1998).
Protein ref. UniProtKB: O19183
DNA ref. GenBank: AF027335
mRNA ref. GenBank: AF027334
Protein sequence
Sequence Properties
first value : protein
second value (mature protein)
Length (aa) %sProtein length in amino acid 604 (587)
PWM (Da) %sMolecular Weight of protein
Protein Mw is calculated by the addition of average isotopic masses
of amino acids in the protein and the average isotopic mass of one water molecule.
Molecular weight values are given in Dalton (Da).
68689.68 (66972.7)
PI (pH) %sIso electric point of protein
Calculation done with EMBOSS parameters.
Please see Dataset for pKi calculation for more information
7.56 (7.40) Peptide Signal %sProtein signal for mature protein.
if exist :cut position of signal peptide.
range: start-end pos of mature protein
cut: 18 range:18-604
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MLARALLLCV ALALGHAANP CCSNPCQNRG VCMSVGFDQY QCDCTRTGFY GENCSTPEFL TRIKLFLKPT PNTVHYILTH FKGVWNIVNS FPFLRNAVMK YVLVSRSHLI ESPPTYNAQY  GYKSWESFSN LSYYTRALPP VADGCPTPMG VKGKKELPDS KEIVEKFLLR RKFIPDPQGT NMMFAFFAQH FTHQFFKTDP KRGPAFTKGL GHGVDLSHIY GETLDRQHKL RLFKDGKMKY  QIINGEVYPP TVKDTQVEMI YPPHIPEHLR FAVGQEVFGL VPGLMMYATI WLREHNRVCD VLKQEHPEWD DERLFQTSRL ILIGETIKIV IEDYVQHLSG YHFKLKFDPE LLFNQQFQYQ  NRIAAEFNTL YHWHPLLPDT FQIDDQEYNF QQFLYNNSIL LEHGLTQFVE SFSRQIAGRV AGGRNVPAAA QKIAKASIDQ SREMKYQSLN EYRKRFRLTP YKSFEELTGE KEMAAELEAL  YGDIDAMELY PALLVEKPRP DAIFGETMVE LGAPFSLKGL LGNPICSPDY WKPSTFGGEV GFKIINTASI QSLICNNVKG CPFTAFSVQD PQLSKAVTIN ASASHSGLDD VNPTVLLKER  STEL 

Retrieve as FASTA  
Remarks Complete sequence from genomic (9 introns) and mRNA.
 

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