The peroxidase database
Entry information :
Entry ID 437
Creation 2007-09-12 (Christophe Dunand)
Last sequence changes 2007-09-12 (Christophe Dunand)
Sequence status complete
Reviewer Marcel Zamocky
Last annotation changes 2007-09-12 (Christophe Dunand)
Peroxidase information
Name GhKat01
Class Catalase    [Orthogroup: Kat001]
Taxonomy Eukaryota Viridiplantae Streptophyta Malvaceae Gossypium External Link
Organism Gossypium hirsutum (upland cotton)    [TaxId: 3635]
Cellular localisation N/D
Tissue type Boll fibers (cotton)
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GhKat01
start..stop
S start..stop
PdelKat01 989 0 1..492 1..492
PtKat01 989 0 1..492 1..492
LuKat 986 0 1..492 1..492
VvKat02 982 0 1..492 1..492
Literature and cross-references
Literature Ni,W., Turley,R.B. and Trelease,R.N. Characterization of a cDNA encoding cottonseed catalase Biochim. Biophys. Acta 1049 (2), 219-222 (1990).
Protein ref. UniProtKB: P17598
mRNA ref. GenBank: X52135
Cluster/Prediction ref. UniGene: Ghi.4681
Protein sequence
Sequence Properties
first value : protein
second value (mature protein)
Length (aa) %sProtein length in amino acid492
PWM (Da) %sMolecular Weight of protein
Protein Mw is calculated by the addition of average isotopic masses
of amino acids in the protein and the average isotopic mass of one water molecule.
Molecular weight values are given in Dalton (Da).
56706.17
PI (ph)%sIso electric point of protein
Calculation done with EMBOSS parameters.
Please see Dataset for pKi calculation for more information
7.07
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MDPYKHRPSS AFNSPFWTTN SGAPVWNNNS SLTVGPRGQY LLEDYHLVEK LANFDRERIP ERVVHARGAS AKGFFEVTHD ISHLTCADFL RAPGVQTPVI VRFSTVIHER GSPETLRDPR  GFAVKFYTRE GNFDLVGNNF PVFFIRDGMK FPDMVHALKP NPKSHIQENW RILDFFSHHP ESLHMFTFLF DDLGVPQDYR HMEGSGVNTY TLINKAGKAH YVKFHWKPTC GVKCLLEDEA  IKVGGANHSH ATQDLYDSIA AGNYPEWKLF IQTIDPDHED KFDFDPLDVT KTWPEDILPL QPVGRLVLNK NIDNFFAENE QLAFCPAIVV PGIYYSDDKL LQTRIFSYSD TQRHRLGPNY  LQLPANAPKC AHHNNHHEGF MNFMHRDEEI NYFPSRYDPV RHAEMFPIPP AVCTGRREKC IIEKENNFKQ PGERYRSWAA DRQERFICRW VDALSDPRVT HEIRSIWISY WSQADKSVGQ  KLASLLNVRP SI 

Retrieve as FASTA  
Remarks Complete sequence from 1 mRNA and 29 ESTs.
 

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