The peroxidase database
Entry information :
Entry ID 5272
Creation 2007-04-17 (Marcel Zamocky)
Last sequence changes 2007-04-17 (Marcel Zamocky)
Sequence status complete
Reviewer Marcel Zamocky
Last annotation changes 2013-03-20 (Marcel Zamocky)
Peroxidase information
Name (synonym) SscKat01 (CAT)
Class Catalase    [Orthogroup: Kat001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Suidae Sus External Link
Organism Sus scrofa (Pig)    [TaxId: 9823]
Cellular localisation Peroxisomal
Tissue types Adipose tissue
Blood
Conceptus
Digestive
Embryonic tissue
Genitourinary
Liver
Muscle
Placenta
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SscKat01
start..stop
S start..stop
BtKat01 1032 0 1..527 1..527
CfaKat01 1030 0 1..527 1..527
MnemKat01 1021 0 1..527 1..527
MmulKat01 1021 0 1..527 1..527
Literature and cross-references
Literature Lin Z.-H., Wang Y.-F., Sarai A., Yasue H. Swine catalase deduced from cDNA and localization of the catalase gene on swine chromosome 2p16-p15. Biochem. Genet. 35:297-302(1997).
Protein ref. UniProtKB: O62839
mRNA ref. GenBank: NM_214301.2
Cluster/Prediction ref. UniGene: Ssc.1018
Protein sequence
Sequence Properties
first value : protein
second value (mature protein)
Length (aa) %sProtein length in amino acid527
PWM (Da) %sMolecular Weight of protein
Protein Mw is calculated by the addition of average isotopic masses
of amino acids in the protein and the average isotopic mass of one water molecule.
Molecular weight values are given in Dalton (Da).
59621.47
PI (ph)%sIso electric point of protein
Calculation done with EMBOSS parameters.
Please see Dataset for pKi calculation for more information
6.8
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MADNRDPASD QMKHWKEQRA AQKPDILTTG SGNPIGDKLN ILTAGPRGPL LVQDVVFTDE MAHFDRERIP ERVVHAKGAG AFGYFEVTHD ITRFSKAKVF EHVGKRTPIA VRFSTVAGES  GSADTVRDPR GFAVKFYTED GNWDLVGNNT PIFFIRDAIL FPSFIHSQKR NPQTHLKDPD MVWDFWSLRP ESLHQVSFLF SDRGIPDGHR HMNGYGSHTF KLVNEKGEAV YCKFHYKTDQ  GIKNLSVEDA ARLPQEDPDY GIRDLFNAIA TGNYPSWTFY IQVMTFQEAE AFPFNPFDLT KVWPHSEYPL IPVGKLVLNR NPVNYFAEVE QMAFDPSNMP PGIEPSPDKM LQGRLFGYPD  THRHRLGANY LQIPVNCPFR ARVANYQRDG PMCFQDNQGG APNYYPNSFS APEQTHSALE HCTRYSGDVQ RFNSANEDNV TQVRTFYLNV LNEEERKRLC ENIAGHLKDA QLFIQKKAVK  NFSDVHPDYG ARIQALLDKY NAExPENAVH TYVQAGSHLA AREKANL 

Retrieve as FASTA  
Remarks Complete sequence from partial GSS (chromo 2), 3 cDNA and 104 ESTs. Strain="Landrace".
 

<< Back