The peroxidase database
Entry information :
Entry ID 5679
Creation 2007-08-10 (Christophe Dunand)
Last sequence changes 2007-08-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2007-09-11 (Gregory Theiler)
Peroxidase information
Name GhGPx04
Class Plant glutathione peroxidase    [Orthogroup: Gpx2002]
Taxonomy Eukaryota Viridiplantae Streptophyta Malvaceae Gossypium External Link
Organism Gossypium hirsutum (upland cotton)    [TaxId: 3635]
Cellular localisation N/D
Tissue types Boll fibers (cotton)
Leaves
Whole plant
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GhGPx04
start..stop
S start..stop
GrGPx04 351 2e-126 1..171 1..171
GhGPx05 307 3e-109 1..170 1..170
GaGPx05 305 3e-108 1..170 1..170
GaGPx04 303 4e-108 1..146 1..146
Literature and cross-references
Literature Shi,Y.H., Zhu,S.W., Mao,X.Z., Feng,J.X., Qin,Y.M., Zhang,L., Cheng ,J., Wei,L.P., Wang,Z.Y. and Zhu,Y.X. Transcriptome profiling, molecular biological, and physiological studies reveal a major role for ethylene in cotton fiber cell elongation Plant Cell 18 (3), 651-664 (2006)
EST ref. GenBank: DV849230 [5' end] DT048298 [3' end]
Cluster/Prediction ref. TGI: TC30271 UniGene: Ghi.5291
Protein sequence
Sequence Properties
first value : protein
second value (mature protein)
Length (aa) %sProtein length in amino acid171
PWM (Da) %sMolecular Weight of protein
Protein Mw is calculated by the addition of average isotopic masses
of amino acids in the protein and the average isotopic mass of one water molecule.
Molecular weight values are given in Dalton (Da).
19114.72
PI (ph)%sIso electric point of protein
Calculation done with EMBOSS parameters.
Please see Dataset for pKi calculation for more information
8.74
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGASESVPQK SIHEFTVKDY KNQDVDLSMY NGKALLVVNV ASKCGLTDSN YTQLTDLYNK YKDQGLEILA FPCNQFLSQE PGTSQDAQEF ACTRYKAEYP IFQKVHVNGP KTEPVYKFLK  TNKSVFLGNR IKWNFTKFLV DKDGHVLARY GPSTTPLAIE ADIKKALGVD M 

Retrieve as FASTA  
Remarks Complete sequence from 6 ESTs. Cultivar="Xu-142".
 

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