The peroxidase database
Entry information :
Entry ID 5681
Creation 2007-08-10 (Christophe Dunand)
Last sequence changes 2007-08-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2007-09-11 (Gregory Theiler)
Peroxidase information
Name GhGPx05
Class Plant glutathione peroxidase    [Orthogroup: Gpx2002]
Taxonomy Eukaryota Viridiplantae Streptophyta Malvaceae Gossypium External Link
Organism Gossypium hirsutum (upland cotton)    [TaxId: 3635]
Cellular localisation N/D
Tissue type Boll fibers (cotton)
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GhGPx05
start..stop
S start..stop
GaGPx05 350 3e-126 1..171 1..171
GrGPx05 348 2e-125 1..171 1..171
GrGPx04 310 3e-110 1..170 1..170
CsGPx05 308 2e-109 1..168 1..168
Literature and cross-references
Literature Taliercio,E., Wendell,J.F., Udall,J.A. and Scheffler,B.E. ESTs from a Variety of Cotton Tissues. Unpublished (2005).
EST ref. GenBank: DW496848
Cluster/Prediction ref. UniGene: Ghi.12704
Protein sequence
Sequence Properties
first value : protein
second value (mature protein)
Length (aa) %sProtein length in amino acid171
PWM (Da) %sMolecular Weight of protein
Protein Mw is calculated by the addition of average isotopic masses
of amino acids in the protein and the average isotopic mass of one water molecule.
Molecular weight values are given in Dalton (Da).
19057.81
PI (ph)%sIso electric point of protein
Calculation done with EMBOSS parameters.
Please see Dataset for pKi calculation for more information
9.66
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGASESVPQK SIHEFTVKNS KGQDVDLSMY KGKVLLVVNV ASKCGFTDSN YTQLTELYNK YKDKGLEILA FPCNQFLKQE PGTSQEAEEF ACTRYKAEYP IFKKVRCNGP NTEPVFKFLK  AKKSGFLGSR IKWNFTKFLV DKDGNVLSRY SPTTTPLAIE GDIKKALGVD T 

Retrieve as FASTA  
Remarks Complete sequence from 3 ESTs. Cultivar="des119".
 

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