The peroxidase database
Entry information :
Entry ID 5687
Creation 2007-08-10 (Christophe Dunand)
Last sequence changes 2007-08-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2007-09-11 (Gregory Theiler)
Peroxidase information
Name GhGPx06-3
Class Plant glutathione peroxidase    [Orthogroup: Gpx2001]
Taxonomy Eukaryota Viridiplantae Streptophyta Malvaceae Gossypium External Link
Organism Gossypium hirsutum (upland cotton)    [TaxId: 3635]
Cellular localisation N/D
Tissue types Boll fibers (cotton)
Ovule
Seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GhGPx06-3
start..stop
S start..stop
GrGPx06-2 346 1e-124 1..170 1..170
GhGPx06-2 315 1e-112 1..170 1..166
GaGPx06-2 315 1e-112 1..170 1..166
SpGPx01 303 1e-107 1..170 1..166
Literature and cross-references
Literature Taliercio,E., Wendell,J.F., Udall,J.A. and Scheffler,B.E. ESTs from a Variety of Cotton Tissues
mRNA ref. GenBank: DW232714
Cluster/Prediction ref. UniGene: Ghi.4736
Protein sequence
Sequence Properties
first value : protein
second value (mature protein)
Length (aa) %sProtein length in amino acid170
PWM (Da) %sMolecular Weight of protein
Protein Mw is calculated by the addition of average isotopic masses
of amino acids in the protein and the average isotopic mass of one water molecule.
Molecular weight values are given in Dalton (Da).
18577.53
PI (ph)%sIso electric point of protein
Calculation done with EMBOSS parameters.
Please see Dataset for pKi calculation for more information
5.82
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAAQSSKGSV HDFTVKDAKG NDVDLSIYKG KVLLIVNVAS QCGLTNSNYT ELSKLYEKYK DQGFEILAFP CNQFGGQEPG NNEEILEFAC TRLKAEYPIF DKVDVNGENA APIYKFLKAS  KGGALGGLLG DDIKWNFAKF LVDKEGHVVD RYAPTTSPIS IEKDIKKLLG 

Retrieve as FASTA  
Remarks Complete sequence from 6 ESTs. Cultivar="des119".
 

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