The peroxidase database
Entry information :
Entry ID 594
Creation 2008-06-19 (Christophe Dunand)
Last sequence changes 2008-06-19 (Christophe Dunand)
Sequence status partial
Reviewer Michele Oliva
Last annotation changes 2008-06-19 (Christophe Dunand)
Peroxidase information
Name TcPrx06
Class Class III peroxidase    [Orthogroup: Prx006]*
Taxonomy Eukaryota Viridiplantae Streptophyta Malvaceae Theobroma External Link
Organism Theobroma cacao (Cacao)    [TaxId: 3641]
Cellular localisation N/D
Tissue types Beans
Leaves
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TcPrx06
start..stop
S start..stop
GaPrx01 428 7e-152 3..225 6..229
GhPrx36 428 9e-152 3..225 6..229
GrPrx08 427 2e-151 3..225 6..229
PtrePrx01 416 6e-147 4..225 3..228
GaPrx01 74 4e-15 285..329 288..332
GhPrx36 74 4e-15 285..329 288..332
GrPrx08 72 1e-14 285..329 288..332
PtrePrx01 72 1e-14 285..329 287..331
Literature and cross-references
Literature Jones,P.G. et al., Planta 216 (2), 255-264 (2002)
EST ref. GenBank: CA796759
Protein sequence
Sequence Properties
first value : protein
second value (mature protein)
Length (aa) %sProtein length in amino acid 329 (307)
PWM (Da) %sMolecular Weight of protein
Protein Mw is calculated by the addition of average isotopic masses
of amino acids in the protein and the average isotopic mass of one water molecule.
Molecular weight values are given in Dalton (Da).
29494.07 (27171.9)
PI (pH) %sIso electric point of protein
Calculation done with EMBOSS parameters.
Please see Dataset for pKi calculation for more information
7.47 (7.19) Peptide Signal %sProtein signal for mature protein.
if exist :cut position of signal peptide.
range: start-end pos of mature protein
cut: 23 range:23-329
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGAAKVLFFF ALLCFSAVST FAENEEDPGL VMSFYKDTCP QAEEIIREQV KLLYKRHKNT AFSWLRNIFH DCAVQSCDAS LLLDSTRRTL SEKETDRSFG LRNFRYIETI KEAVERECPG  VVSCADILVL SARDGIVSLG GPYIPLKTGR RDGRRTSKVV EEYLPDHNET ISAVLDRFSA MGIDTPGVVA LLGAHSVGRT HCVKLVHRLY PDVDPALNPD HVPHMxxGxx xxxxxxxxxx  xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxKKMPxS QDxxFKEFAR AIxILxENNP LxGTKGEIRN QCNVANKLH 

Retrieve as FASTA  
Remarks Partial sequence from 17 EST. No overlap between 5' and 3.
 

<< Back