The peroxidase database
Entry information :
Entry ID 6808
Creation 2009-05-18 (Marcel Zamocky)
Last sequence changes 2009-05-18 (Marcel Zamocky)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2009-06-02 (Christophe Dunand)
Peroxidase information
Name SspDyPrx
Class DyP-type peroxidase C    [Orthogroup: DyPrxC001]
Taxonomy Bacteria Cyanobacteria Synechococcus External Link
Organism Synechococcus sp.    [TaxId: 1131]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SspDyPrx
start..stop
S start..stop
SavDyPrx03-2 150 1e-39 172..633 83..453
MYspDyPrx03_JLS 142 4e-37 266..632 173..441
MYspDyPrx03_MCS 142 4e-37 266..632 173..441
MxDyPrx 142 5e-37 267..635 164..436
MYspDyPrx03_JLS 49 2e-06 62..120 48..107
MYspDyPrx03_MCS 49 2e-06 62..120 48..107
MxDyPrx 48 5e-06 9..174 6..163
SavDyPrx03-2 48 6e-06 9..142 24..140
Literature and cross-references
Literature Palenik B., Ren Q., Dupont C.L., Myers G.S., Heidelberg J.F., Badger J.H., Madupu R., Nelson W.C., Brinkac L.M., Dodson R.J., Durkin A.S., Daugherty S.C., Sullivan S.A., Khouri H., Mohamoud Y., Halpin R., Paulsen I.T. Genome sequence of Synechococcus CC9311: insights into adaptation to a coastal environment. Proc. Natl. Acad. Sci. U.S.A. 103:13555-13559(2006)
Protein ref. UniProtKB: Q0I6R1
DNA ref. GenBank: CP000435 (2347152..2345242)
Protein sequence
Sequence Properties
first value : protein
second value (mature protein)
Length (aa) %sProtein length in amino acid636
PWM (Da) %sMolecular Weight of protein
Protein Mw is calculated by the addition of average isotopic masses
of amino acids in the protein and the average isotopic mass of one water molecule.
Molecular weight values are given in Dalton (Da).
71935.58
PI (ph)%sIso electric point of protein
Calculation done with EMBOSS parameters.
Please see Dataset for pKi calculation for more information
6.64
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTLIFDRLDI QGNILLPYGR SSYPVARHFI FNVRDQDEAR KFLSWIQPQI TTAQFFPSKR SDQMQIPADQ LRKDIPEVLL NIAFTASGLN ALGVPNSVLR QFPDAFLDGM WERAEMLNDN  RLDWNNAWKD SEHDKITHIM ISLRVAFNSC LKEVCLRSGD SFSKSDYHSQ ETFKLARSMM IENLDQVSRH LLEQAERHSL VALTGHSSAD PESKWLECES LCHSRLQDLA IAGISEDQYL  ADLDNQKKRR HVASSADLTD LRYSEYEHFG FFDGIGDPVF NGQYPASFQA EMAQGQGHLS CGQWRPIAPG EFLLGYPNEA QETTCHPMPY TFSRNGTFMA VRKLEQNVTA FHNALLNQTP  LMEHWLDQVE CSTSSKQPST TYQFTKALKI LRAKLVGRWD DGTPLVHAPT YELWLSFRER LLTLAGEARK GGPAAKEAWK QFKTKFTRFT FESDDTKGRR CPFASHIRRS NPRDSGDPSV  RNDSDPSETS QASSLLVNRR RILRRGMTYG PPSELKHENP IDHDQSTPAD SERGTFFVAI CADLARQFEF MQQQWLNYGS DFNLGNDICP IAGALHPSDV SDRNSTKVMI SSERPDGSCS  LPFVARTSPQ PVVCRGGAYF FVPSLSAIRL LAENRF 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="CC9311".
 

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