Entry information : NtPrx09-1B (TOBPXDLF / NtPrx09b)
Entry ID 1
Creation 2006-06-15 (Christian Obinger)
Last sequence changes 2006-06-15 (Christian Obinger)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2010-02-18 (Christophe Dunand)
Peroxidase information: NtPrx09-1B (TOBPXDLF / NtPrx09b)
Name (synonym) NtPrx09-1B (TOBPXDLF / NtPrx09b)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type Cell culture
Inducer Lignification
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx09-1B
start..stop
S start..stop
NtoPrx01 621 0 1..324 1..324
NtPrx09-1A 620 0 1..324 1..324
LePrx05 535 0 1..324 1..325
StPrx20 535 0 1..324 1..324
Literature and cross-references NtPrx09-1B (TOBPXDLF / NtPrx09b)
Literature REFERENCE 1 Lagrimini,L.M., Burkhart,W., Moyer,M. and Rothstein,S. Molecular cloning of complementary DNA encoding the lignin-forming peroxidase from tobacco: Molecular analysis and tissue-specific expression Proc. Natl. Acad. Sci. U.S.A. 84, 7542-7546 (1987)
REFERENCE 2 Diaz-De-Leon,F., Klotz,K.L. and Lagrimini,L.M. Nucleotide sequence of the tobacco (Nicotiana tabacum) anionic peroxidase gene. Plant Physiol. 101 (3), 1117-1118 (1993)
Protein ref. UniProtKB:   P11965   Q40555 [Incorrect prediction]
DNA ref. GenBank:   D11396   L02124
mRNA ref. GenBank:   J02979.1
EST ref. GenBank:   DW000781.1 [5' end]   EB425356.1 [3' end]
Cluster/Prediction ref. UniGene:   Nta.6928
Protein sequence: NtPrx09-1B (TOBPXDLF / NtPrx09b)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324 (302)
PWM (Da):   %s   34538.03 (32212.8) Transmb domain:   %s   i7-29o
PI (pH):   %s   4.5 (4.43) Peptide Signal:   %s   cut: 23 range:23-324
Sequence
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Send to Peroxiscan
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MSFLRFVGAI LFLVAIFGAS NAQLSATFYD TTCPNVTSIV RGVMDQRQRT DARAGAKIIR LHFHDCFVNG CDGSILLDTD GTQTEKDAPA NVGAGGFDIV DDIKTALENV CPGVVSCADI  LALASEIGVV LAKGPSWQVL FGRKDSLTAN RSGANSDIPS PFETLAVMIP QFTNKGMDLT DLVALSGAHT FGRARCGTFE QRLFNFNGSG NPDLTVDATF LQTLQGICPQ GGNNGNTFTN 
LDISTPNDFD NDYFTNLQSN QGLLQTDQEL FSTSGSATIA IVNRYAGSQT QFFDDFVSSM IKLGNISPLT GTNGQIRTDC KRVN 

Retrieve as FASTA  
Remarks Complete sequence from 2 mRNA and 2 genomic (3 introns) and 32 ESTs. Unigene compiles ESTs from both alleles. Cultivar="K326".
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GAATTCGGAA AAAGTTGTCA ATCATGTCTT TTTTAAGATT TGTTGGTGCG ATTCTTTTCT TGGTTGCAAT TTTTGGAGCA TCAAATGCTC AATTAAGTGC AACATTTTAT GATACCACTT  GCCCTAATGT TACAAGTATT GTACGTGGTG TTATGGATCA AAGGCAACGT ACTGATGCTC GAGCTGGTGC TAAAATTATT CGTCTTCATT TCCATGATTG TTTTGTTAAT GGTTGTGATG  GATCAATTTT GTTAGACACA GATGGGACTC AAACTGAGAA AGATGCACCT GCTAATGTAG GTGCAGGAGG ATTTGATATT GTGGATGATA TTAAAACTGC ACTAGAGAAT GTATGCCCTG  GTGTTGTATC TTGTGCAGAT ATTTTAGCCC TTGCATCTGA AATTGGAGTT GTCTTGGCTA AAGGTCCGTC GTGGCAAGTA CTTTTTGGCA GAAAAGACAG CTTAACAGCA AACCGATCTG  GAGCTAATAG TGATATTCCT AGCCCCTTTG AAACACTTGC TGTAATGATA CCACAATTCA CCAATAAGGG GATGGATTTA ACTGATCTTG TTGCTCTATC AGGTGCACAC ACATTTGGAA  GAGCAAGATG TGGTACTTTT GAACAACGTC TCTTTAACTT CAATGGCAGT GGTAACCCTG ATCTAACCGT AGACGCTACG TTTTTACAAA CATTACAAGG AATTTGTCCT CAAGGTGGAA  ACAATGGCAA TACTTTTACA AATCTTGATA TATCAACACC TAATGATTTT GATAATGACT ATTTCACTAA TCTTCAAAGT AATCAAGGAC TTCTTCAAAC TGATCAAGAG TTGTTTTCCA  CATCTGGATC TGCTACAATT GCTATAGTTA ATCGTTATGC TGGTAGTCAA ACTCAGTTTT TTGATGATTT TGTTAGCTCA ATGATTAAAT TGGGTAATAT AAGTCCATTA ACTGGTACTA  ACGGACAGAT TAGGACAGAT TGTAAGAGGG TTAATTAGTT AATTAATCAA GGAGATTAAT TATCAAGAGT GCTTTAATTT CTGCATGTTC TTGTGTTGTT TAGGCCCCTA AAGAAAGATT  GTCACAAGTT TGATGTCTTG AGTTGTTATT TTTGTTCATC TTTTTCTCGC TTATGTTGTT TTATGTAATG TAATATGTGC TGAAATGGCA ATTCCAATAA GGATGTAATG TGAAATAGCA 
ATTCCAATAA ATTAAGGATT TTATCCATCT CTTTCTTTTG AGT 

Retrieve as FASTA