Entry information : ZmPrx107 (GRMZM2G122853)
Entry ID 1003
Creation 2005-12-13 (Christophe Dunand)
Last sequence changes 2005-12-13
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-01-25 (Christophe Dunand)
Peroxidase information: ZmPrx107 (GRMZM2G122853)
Name (synonym) ZmPrx107 (GRMZM2G122853)
Class Class III peroxidase    [Orthogroup: Prx082]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea
Organism Zea mays    [TaxId: 4577 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ZmPrx107
start..stop
S start..stop
ZmPrx44 684 0 1..348 1..348
SbPrx58 675 0 1..348 1..348
SbPrx59 652 0 1..348 1..349
SiPrx09 629 0 1..348 1..347
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 18804..19031 228 N° 2 17892..18710 819  
complement(join(17892..18710,18804..19031))


exon

Literature and cross-references ZmPrx107 (GRMZM2G122853)
Literature Bohnert,H. et al., NSF Grant DBI-0211842: Functional Genomics of Root Growth and Root Signaling Under Drought. unpublished
Protein ref. UniProtKB:   B6T7D0 [3' end]
DNA ref. GenBank:   AC187051.4 (119894..121030)
Cluster/Prediction ref. UniGene:   Zm.94452
Protein sequence: ZmPrx107 (GRMZM2G122853)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   348 (320)
PWM (Da):   %s   38147.48 (35384.9)  
PI (pH):   %s   6.78 (6.64) Peptide Signal:   %s   cut: 29 range:29-348
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKLSVAVLCALLAVQAAVLLATVPTSQASELEVGYYSKKCKGVENVVKWHVIKALKASRRTGAALVRLLFHDCFVRGCDGSVLLDASYDNPHPEKEAPVNIGLAAFDLLEEIKAAVEKRCPGVVSCSDILIYAARDAASVLSNGHVHFAVPAGRLDGFVSKAEEAQAELPDSNQDVQQLIDNFARKNFTVEELVILTGAHSIGQGHCSSFTGRLSEPSQQITPAYRDLLNYKCSQGSNPPVDNNVRDEDYDVVARFMPGFTSRVRKIPDFLDNSFYHNNLAKIVTFHSDWTLLTHKEAFGHVVEYAENATLWDEDFSDSLLKLSKLPMPKGSKGEIRKKCSVVNHRLY*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 8, intron 1) and 62 ESTs. The TCs contain ESTs from ZmPrx44. Cultivar="W23", "B73" and "Hybrid 35A19". Also found in AC183972.3.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGCTCTCGGTGGCAGTCCTCTGCGCGCTTCTGGCTGTCCAGGCGGCGGTGCTCCTCGCCACCGTGCCGACGTCGCAGGCCAGCGAGCTGGAGGTCGGGTACTACAGCAAGAAATGC
AAGGGCGTGGAGAACGTGGTGAAGTGGCACGTGATCAAGGCGCTCAAGGCCAGCCGCCGCACCGGCGCCGCTCTCGTCCGCCTTCTCTTCCATGACTGCTTCGTCAGG
GTAATAAGAGCA
GCAGCATGCGCATTCATGTACATACTACTTGGCCGTATATTAGTTGATTGATTGATTGAACTGGACATCCATGCAATGCAGGGATGCGATGGTTCTGTCCTCCTGGACGCTTCCTACGAC
AACCCTCATCCGGAGAAGGAGGCGCCGGTGAACATCGGCCTCGCCGCCTTCGACCTCCTGGAGGAGATCAAGGCCGCTGTCGAGAAGAGGTGCCCCGGCGTCGTCTCCTGCTCGGACATC
CTCATCTACGCGGCCCGCGACGCGGCCAGCGTCCTCAGCAACGGCCACGTCCACTTCGCCGTCCCCGCCGGCCGCCTGGACGGCTTCGTCTCCAAGGCCGAGGAGGCCCAGGCGGAGCTC
CCGGACTCCAACCAAGACGTGCAGCAGCTCATCGACAACTTCGCCAGGAAGAACTTCACGGTGGAGGAGCTCGTCATCCTCACCGGGGCGCACTCCATCGGCCAGGGCCACTGCTCGTCC
TTCACCGGCCGCCTCTCCGAGCCATCGCAGCAGATCACCCCGGCGTACCGCGACCTGCTCAACTACAAGTGCTCCCAGGGGTCCAACCCGCCCGTGGACAACAACGTCCGCGACGAGGAC
TACGACGTGGTGGCGAGGTTCATGCCGGGGTTCACCAGCCGGGTGCGCAAGATCCCCGACTTCCTGGACAACTCCTTCTACCACAACAACCTGGCCAAGATCGTCACCTTCCACTCCGAC
TGGACGCTGCTCACGCACAAGGAGGCGTTCGGCCACGTCGTGGAGTACGCCGAGAACGCCACGCTATGGGACGAGGACTTCTCGGACTCGCTGCTCAAGCTCAGCAAGCTGCCCATGCCG
AAAGGAAGCAAGGGAGAGATCAGGAAGAAGTGCAGCGTCGTTAACCACCGCTTATACTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGCTCTCGGTGGCAGTCCTCTGCGCGCTTCTGGCTGTCCAGGCGGCGGTGCTCCTCGCCACCGTGCCGACGTCGCAGGCCAGCGAGCTGGAGGTCGGGTACTACAGCAAGAAATGC
AAGGGCGTGGAGAACGTGGTGAAGTGGCACGTGATCAAGGCGCTCAAGGCCAGCCGCCGCACCGGCGCCGCTCTCGTCCGCCTTCTCTTCCATGACTGCTTCGTCAGG
GGATGCGATGGT
TCTGTCCTCCTGGACGCTTCCTACGACAACCCTCATCCGGAGAAGGAGGCGCCGGTGAACATCGGCCTCGCCGCCTTCGACCTCCTGGAGGAGATCAAGGCCGCTGTCGAGAAGAGGTGC
CCCGGCGTCGTCTCCTGCTCGGACATCCTCATCTACGCGGCCCGCGACGCGGCCAGCGTCCTCAGCAACGGCCACGTCCACTTCGCCGTCCCCGCCGGCCGCCTGGACGGCTTCGTCTCC
AAGGCCGAGGAGGCCCAGGCGGAGCTCCCGGACTCCAACCAAGACGTGCAGCAGCTCATCGACAACTTCGCCAGGAAGAACTTCACGGTGGAGGAGCTCGTCATCCTCACCGGGGCGCAC
TCCATCGGCCAGGGCCACTGCTCGTCCTTCACCGGCCGCCTCTCCGAGCCATCGCAGCAGATCACCCCGGCGTACCGCGACCTGCTCAACTACAAGTGCTCCCAGGGGTCCAACCCGCCC
GTGGACAACAACGTCCGCGACGAGGACTACGACGTGGTGGCGAGGTTCATGCCGGGGTTCACCAGCCGGGTGCGCAAGATCCCCGACTTCCTGGACAACTCCTTCTACCACAACAACCTG
GCCAAGATCGTCACCTTCCACTCCGACTGGACGCTGCTCACGCACAAGGAGGCGTTCGGCCACGTCGTGGAGTACGCCGAGAACGCCACGCTATGGGACGAGGACTTCTCGGACTCGCTG
CTCAAGCTCAGCAAGCTGCCCATGCCGAAAGGAAGCAAGGGAGAGATCAGGAAGAAGTGCAGCGTCGTTAACCACCGCTTATACTAA

Retrieve as FASTA