Entry information : PcapCP01
Entry ID 10039
Creation 2012-01-03 (Christophe Dunand)
Last sequence changes 2012-01-03 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-01-03 (Christophe Dunand)
Peroxidase information: PcapCP01
Name PcapCP01
Class Catalase peroxidase    [Orthogroup: CP002]
Taxonomy Eukaryota Phytophthora
Organism Phytophthora capsici    [TaxId: 4784 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PcapCP01
start..stop
S start..stop
PiCP01 1236 0 1..674 1..690
PsojCP 1169 0 1..674 1..687
PcapCP02 1155 0 1..674 1..687
PsojCP03 1144 0 1..674 1..687
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 189485..191509 2025  
join(189485..191509)


exon

Literature and cross-references PcapCP01
DNA ref. JGI genome:   PHYCAscaffold_82 (189485..191509)
Cluster/Prediction ref. JGI gene:   530893
Protein sequence: PcapCP01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   675 (653)
PWM (Da):   %s   73050.88 (70755.8)  
PI (pH):   %s   4.67 (4.67) Peptide Signal:   %s   cut: 22 range:22-674
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MNIYFVTFIA AVAGFSSGAN AGKCPFGFDE VASVKDQDRQ ISNELYDAKS CDVIDYDLVK VDLEKLMTDS QDFWPADFGH YGGLFIRLAW HCNGSYRRAD GRGGCDGGRI RFNPEHSWAD  NTNLDKALKL LNPIKDKYGD ALSWGDLIVL SGDVAIKSMG GPVLGFCGGR RDDVDGTSSL QLGPSPEQEA VAPCEVDGQC KEPLGPTTMG LIYVNPEGPM GKPDPVGSVA DIRDTFKRMG  MDDRETVALI GGGHAFGKTH GACPTGAGPS PLEDPENPWP GTCGEGEMKG KGNNTFTSGF EGQWTFTPTK WGNGYFKGLT SFEWEKFDGP GGHVQWRPVP DTNPPVRMLT ADIALLHDES  YLKISKEFAA DQAALDDAFS HAWYKLVSRD MGPVARCRGN DIPPVQPFQN PLPATPENLP DFDAVRADVR ELLKKSADNG ALFVHAAWQC ASTFRITDYA GGCNGAKIRF APQKDWPVNA  GVDKIIATLE PIKEKYSTLS TADLIVLAGQ VALEDGGNVK IDFLGGRTDA ENGDGDDILA PREYYNSTVT GVRDNIKILG VSPEEAVALA GRPRSAAQQK LLGYSGSYSN SSATLSNEFF 
KVLLNETWSP VSSKEFKAGD KEIYMLDTDV ALLDAPELKA AVEKFAADEY AFKKVFTKAW NKVMTADHFK ADSY* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron).
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAACATCT ACTTCGTCAC TTTCATCGCT GCAGTTGCAG GATTTTCCTC AGGAGCTAAC GCTGGCAAGT GTCCATTCGG CTTTGATGAA GTTGCCTCCG TCAAGGATCA GGACCGTCAG  ATCTCCAACG AACTCTACGA CGCCAAGAGC TGCGATGTCA TCGACTACGA CCTTGTCAAG GTCGATCTTG AGAAGCTGAT GACGGACTCG CAGGACTTCT GGCCCGCCGA CTTCGGCCAC  TACGGAGGTC TCTTCATCCG TCTCGCGTGG CACTGCAACG GCTCGTACCG CCGTGCTGAC GGTCGTGGTG GCTGTGACGG TGGGCGTATC CGCTTCAACC CCGAGCACAG CTGGGCCGAC  AACACGAACC TGGACAAGGC TCTGAAGCTG CTGAACCCCA TCAAGGACAA GTACGGTGAC GCGCTTTCGT GGGGTGACCT CATCGTGCTG TCGGGAGACG TGGCCATCAA GAGCATGGGC  GGCCCCGTGT TGGGCTTCTG CGGAGGCCGT CGTGACGATG TTGATGGAAC CAGCAGTCTG CAGTTGGGCC CTTCGCCCGA ACAGGAGGCT GTGGCCCCGT GCGAGGTGGA CGGTCAATGC  AAAGAGCCGC TTGGCCCTAC GACGATGGGT CTCATCTACG TGAACCCTGA GGGTCCGATG GGCAAGCCTG ACCCTGTTGG TTCTGTGGCA GACATTCGCG ACACCTTCAA GCGCATGGGC  ATGGACGACC GCGAGACTGT CGCTCTGATC GGTGGTGGCC ACGCATTCGG CAAGACGCAC GGTGCCTGTC CGACGGGTGC TGGTCCGTCA CCGCTTGAGG ACCCGGAGAA CCCGTGGCCT  GGAACCTGCG GTGAAGGCGA AATGAAGGGC AAGGGCAACA ACACGTTCAC CAGTGGCTTC GAAGGCCAGT GGACGTTTAC ACCGACTAAG TGGGGCAACG GTTATTTCAA GGGTCTTACC  AGCTTTGAGT GGGAGAAGTT TGACGGTCCG GGTGGACACG TGCAGTGGCG TCCTGTGCCC GACACGAACC CTCCCGTTCG CATGCTGACG GCCGATATCG CTCTTCTGCA CGACGAGAGC  TACTTGAAGA TCTCGAAGGA ATTCGCCGCT GACCAGGCCG CTCTGGACGA TGCATTCTCG CACGCATGGT ATAAGTTGGT GTCGCGCGAT ATGGGTCCTG TCGCCCGTTG CCGTGGTAAC  GACATCCCTC CTGTGCAGCC GTTCCAGAAC CCGCTGCCTG CCACCCCGGA GAACCTCCCG GACTTCGACG CCGTGCGCGC AGACGTCCGT GAACTCCTGA AGAAGTCGGC GGATAACGGC  GCTCTGTTCG TGCACGCGGC GTGGCAGTGT GCTTCGACGT TCCGAATCAC GGACTACGCC GGCGGTTGCA ACGGCGCCAA GATCCGCTTC GCACCGCAGA AGGACTGGCC GGTCAATGCT  GGTGTGGACA AGATCATCGC TACGCTGGAG CCGATCAAGG AGAAGTACTC GACGCTGTCA ACCGCTGACC TGATCGTTCT TGCCGGTCAG GTGGCGCTTG AGGACGGTGG CAACGTGAAG  ATCGACTTCC TGGGTGGCCG CACGGACGCC GAGAACGGCG ACGGTGACGA CATCCTCGCC CCGCGCGAGT ACTACAACTC GACGGTGACT GGCGTCCGCG ACAACATTAA GATCCTGGGT  GTGTCTCCGG AAGAGGCTGT GGCTCTTGCC GGTCGCCCGC GCAGTGCAGC GCAGCAGAAG CTGTTGGGTT ACAGCGGGTC ATACAGCAAC AGCTCGGCGA CCCTTTCCAA CGAGTTCTTC  AAGGTGTTGC TGAACGAGAC GTGGTCGCCG GTGTCTTCTA AGGAATTCAA GGCGGGCGAT AAGGAAATTT ACATGCTCGA CACGGACGTG GCTCTTCTGG ATGCACCTGA GCTGAAGGCA 
GCTGTGGAGA AGTTCGCTGC TGACGAGTAC GCTTTCAAGA AGGTTTTCAC GAAGGCCTGG AACAAGGTCA TGACGGCCGA TCACTTTAAG GCCGACAGCT ACTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAACATCT ACTTCGTCAC TTTCATCGCT GCAGTTGCAG GATTTTCCTC AGGAGCTAAC GCTGGCAAGT GTCCATTCGG CTTTGATGAA GTTGCCTCCG TCAAGGATCA GGACCGTCAG  ATCTCCAACG AACTCTACGA CGCCAAGAGC TGCGATGTCA TCGACTACGA CCTTGTCAAG GTCGATCTTG AGAAGCTGAT GACGGACTCG CAGGACTTCT GGCCCGCCGA CTTCGGCCAC  TACGGAGGTC TCTTCATCCG TCTCGCGTGG CACTGCAACG GCTCGTACCG CCGTGCTGAC GGTCGTGGTG GCTGTGACGG TGGGCGTATC CGCTTCAACC CCGAGCACAG CTGGGCCGAC  AACACGAACC TGGACAAGGC TCTGAAGCTG CTGAACCCCA TCAAGGACAA GTACGGTGAC GCGCTTTCGT GGGGTGACCT CATCGTGCTG TCGGGAGACG TGGCCATCAA GAGCATGGGC  GGCCCCGTGT TGGGCTTCTG CGGAGGCCGT CGTGACGATG TTGATGGAAC CAGCAGTCTG CAGTTGGGCC CTTCGCCCGA ACAGGAGGCT GTGGCCCCGT GCGAGGTGGA CGGTCAATGC  AAAGAGCCGC TTGGCCCTAC GACGATGGGT CTCATCTACG TGAACCCTGA GGGTCCGATG GGCAAGCCTG ACCCTGTTGG TTCTGTGGCA GACATTCGCG ACACCTTCAA GCGCATGGGC  ATGGACGACC GCGAGACTGT CGCTCTGATC GGTGGTGGCC ACGCATTCGG CAAGACGCAC GGTGCCTGTC CGACGGGTGC TGGTCCGTCA CCGCTTGAGG ACCCGGAGAA CCCGTGGCCT  GGAACCTGCG GTGAAGGCGA AATGAAGGGC AAGGGCAACA ACACGTTCAC CAGTGGCTTC GAAGGCCAGT GGACGTTTAC ACCGACTAAG TGGGGCAACG GTTATTTCAA GGGTCTTACC  AGCTTTGAGT GGGAGAAGTT TGACGGTCCG GGTGGACACG TGCAGTGGCG TCCTGTGCCC GACACGAACC CTCCCGTTCG CATGCTGACG GCCGATATCG CTCTTCTGCA CGACGAGAGC  TACTTGAAGA TCTCGAAGGA ATTCGCCGCT GACCAGGCCG CTCTGGACGA TGCATTCTCG CACGCATGGT ATAAGTTGGT GTCGCGCGAT ATGGGTCCTG TCGCCCGTTG CCGTGGTAAC  GACATCCCTC CTGTGCAGCC GTTCCAGAAC CCGCTGCCTG CCACCCCGGA GAACCTCCCG GACTTCGACG CCGTGCGCGC AGACGTCCGT GAACTCCTGA AGAAGTCGGC GGATAACGGC  GCTCTGTTCG TGCACGCGGC GTGGCAGTGT GCTTCGACGT TCCGAATCAC GGACTACGCC GGCGGTTGCA ACGGCGCCAA GATCCGCTTC GCACCGCAGA AGGACTGGCC GGTCAATGCT  GGTGTGGACA AGATCATCGC TACGCTGGAG CCGATCAAGG AGAAGTACTC GACGCTGTCA ACCGCTGACC TGATCGTTCT TGCCGGTCAG GTGGCGCTTG AGGACGGTGG CAACGTGAAG  ATCGACTTCC TGGGTGGCCG CACGGACGCC GAGAACGGCG ACGGTGACGA CATCCTCGCC CCGCGCGAGT ACTACAACTC GACGGTGACT GGCGTCCGCG ACAACATTAA GATCCTGGGT  GTGTCTCCGG AAGAGGCTGT GGCTCTTGCC GGTCGCCCGC GCAGTGCAGC GCAGCAGAAG CTGTTGGGTT ACAGCGGGTC ATACAGCAAC AGCTCGGCGA CCCTTTCCAA CGAGTTCTTC  AAGGTGTTGC TGAACGAGAC GTGGTCGCCG GTGTCTTCTA AGGAATTCAA GGCGGGCGAT AAGGAAATTT ACATGCTCGA CACGGACGTG GCTCTTCTGG ATGCACCTGA GCTGAAGGCA 
GCTGTGGAGA AGTTCGCTGC TGACGAGTAC GCTTTCAAGA AGGTTTTCAC GAAGGCCTGG AACAAGGTCA TGACGGCCGA TCACTTTAAG GCCGACAGCT ACTAA 

Retrieve as FASTA