Entry information : PcapCP02
Entry ID 10042
Creation 2012-01-03 (Christophe Dunand)
Last sequence changes 2012-01-03 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-01-03 (Christophe Dunand)
Peroxidase information: PcapCP02
Name PcapCP02
Class Catalase peroxidase    [Orthogroup: CP002]
Taxonomy Eukaryota Phytophthora
Organism Phytophthora capsici    [TaxId: 4784 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PcapCP02
start..stop
S start..stop
PsojCP03 1325 0 1..687 1..687
PraCP02 1301 0 1..687 1..687
PiCP02 1291 0 1..687 1..687
PiCP[P]02 1183 0 2..687 1..688
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 279672..281735 2064  
complement(join(279672..281735))


exon

Literature and cross-references PcapCP02
DNA ref. JGI genome:   PHYCAscaffold_17 (281735..279672) [Incorrect prediction]
Cluster/Prediction ref. JGI gene:   545159 [Incorrect prediction]
Protein sequence: PcapCP02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   687 (666)
PWM (Da):   %s   73791.01 (71734.9)  
PI (pH):   %s   4.47 (4.42) Peptide Signal:   %s   cut: 22 range:22-687
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MNVRLTAFAA ALAGLSRGAN AASCPFGYDS VATVHQADRQ ISSELYAAQS CDVIDYELVK ADLLHLMTDS QDFWPADFGH YGGLFIRLAW HCNGSYRRAD GRGGCDGGRI RFNPERSWAD  NTNLDKALDL LEPIKLKYGD ALSWGDLIVL SGDVAIESMG GPVLGFCGGR RDDVDGTSSL QLGPTPEQES VAPCEVDGQC KEPLGPTTMG LIYVNPEGPM GNPDPVGSVA DVRDTFERMG  MNDRETVALI GGGHAFGKTH GACPTGPGPD PTQDPLNPWA GTCGEGALKG KGNNTFTSGF EGAWTFTPTK WGNGYFKGLT GFEWEKFDGP GGHVQWRPVP DTTPPVRMLT ADIALLHDES  YHNISLEFAA NQTALDEAFS HAWYKLMSRD VGPVARCRGN DVPPAQPFQN PLPPTPASLS DFDAVRSDIR SLLTKSVDGL TSDASNDGTP YNGALFVHAA WQCASTFRIT DYAGGCNGAR  IRFSPEKDWP VNAGVDKIIA ALEPVKESYP TLSTADLIVL AGQVALEDAG NVTIDFLGGR TDAENGNGTE ILAPREYYNT TLIAVRDNIK ILGVSPVEAV ALAGRPRSVE QQKVLGYSGS 
YSNNSLTLSN EYFQVLLNET WTEVSEKEFK AEGKDVYMMD TDLALLAAPE LKEAVQLFAS EETVFKHVFS SAWAKVMTAD HFNASSY 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron). Incorrect prediction from JGI based on the incorrect prediction of P.infestans (1 intron).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAACGTCC GCCTCACCGC CTTCGCCGCC GCGCTCGCCG GCCTGTCCAG AGGTGCCAAC GCCGCTAGCT GCCCGTTCGG CTACGACTCG GTCGCCACCG TCCACCAGGC CGACCGCCAG  ATCTCCAGCG AGCTCTACGC GGCGCAGAGT TGCGATGTCA TTGACTACGA GCTCGTCAAG GCCGACCTGC TGCACCTGAT GACGGACTCG CAGGACTTCT GGCCCGCCGA CTTCGGCCAC  TACGGCGGTC TCTTCATCCG CCTGGCATGG CACTGCAACG GCTCGTACCG CCGCGCCGAC GGCCGCGGAG GCTGCGACGG CGGCCGCATC CGCTTTAACC CGGAGCGCAG CTGGGCCGAC  AACACCAACC TGGACAAGGC GCTCGACCTG CTGGAGCCCA TCAAGCTCAA GTACGGCGAC GCCCTGTCGT GGGGCGATCT CATCGTGCTG TCCGGCGACG TCGCCATCGA GAGCATGGGT  GGCCCCGTGC TCGGCTTCTG CGGTGGTCGC CGCGACGATG TCGACGGGAC GAGCAGCTTG CAGCTGGGTC CGACGCCCGA GCAGGAGAGC GTGGCGCCAT GCGAGGTCGA CGGTCAGTGC  AAGGAGCCTT TGGGCCCCAC CACCATGGGT CTCATCTACG TGAACCCGGA GGGTCCCATG GGTAACCCCG ACCCGGTTGG ATCGGTGGCC GACGTGCGCG ACACCTTCGA GCGTATGGGC  ATGAACGACC GCGAGACGGT GGCGCTGATC GGTGGCGGCC ACGCCTTCGG CAAGACGCAC GGCGCGTGCC CAACGGGCCC CGGCCCCGAT CCGACGCAGG ACCCCCTGAA CCCCTGGGCT  GGAACGTGCG GTGAGGGTGC GCTCAAGGGC AAGGGCAACA ACACCTTCAC GAGCGGCTTC GAAGGCGCAT GGACATTCAC GCCCACCAAG TGGGGCAACG GCTACTTCAA GGGTCTCACC  GGCTTCGAGT GGGAGAAGTT CGACGGTCCG GGCGGTCACG TGCAGTGGCG CCCCGTGCCG GACACGACGC CGCCCGTGCG CATGCTGACG GCCGACATTG CTCTGCTGCA CGACGAGAGC  TACCATAACA TCTCGCTCGA GTTCGCTGCC AACCAGACTG CTCTGGATGA GGCGTTCTCG CACGCCTGGT ACAAGCTGAT GTCGCGCGAC GTGGGTCCGG TAGCTCGTTG CCGTGGTAAC  GACGTGCCAC CCGCTCAGCC GTTCCAGAAC CCGCTGCCGC CGACGCCCGC CTCGCTGTCG GACTTCGACG CCGTGCGCTC GGACATCCGT TCGCTGTTGA CGAAGTCGGT GGACGGCCTG  ACGAGCGACG CCAGCAACGA CGGCACGCCG TACAACGGCG CTCTGTTCGT GCATGCAGCG TGGCAGTGTG CGTCGACGTT CCGCATCACG GACTACGCTG GCGGTTGCAA CGGGGCCCGC  ATCCGCTTCT CGCCCGAGAA GGACTGGCCG GTGAACGCTG GTGTGGACAA GATCATTGCC GCTCTGGAGC CCGTGAAGGA GTCGTACCCG ACGTTGTCGA CGGCTGACTT GATCGTGCTG  GCTGGGCAAG TGGCCCTGGA GGACGCTGGC AACGTGACCA TCGACTTCTT GGGAGGTCGT ACAGACGCCG AGAACGGCAA CGGCACGGAG ATTCTGGCCC CTCGCGAGTA CTACAACACG  ACTTTGATCG CTGTGCGCGA CAACATCAAG ATCCTCGGTG TGTCACCGGT CGAGGCGGTG GCTCTGGCTG GTCGCCCGCG CAGTGTGGAG CAGCAGAAGG TGCTGGGCTA CAGCGGCTCG  TACAGCAACA ACTCGCTCAC TCTGTCGAAC GAGTACTTCC AGGTGCTCCT GAACGAGACG TGGACGGAAG TGTCGGAGAA GGAGTTCAAG GCGGAAGGCA AGGACGTGTA CATGATGGAC  ACGGATCTGG CTCTGCTGGC GGCACCCGAA CTGAAGGAGG CGGTGCAGCT GTTCGCGTCG GAGGAGACCG TCTTCAAGCA CGTCTTCTCT TCGGCCTGGG CCAAGGTCAT GACCGCCGAC 
CACTTTAACG CTAGCAGCTA CTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAACGTCC GCCTCACCGC CTTCGCCGCC GCGCTCGCCG GCCTGTCCAG AGGTGCCAAC GCCGCTAGCT GCCCGTTCGG CTACGACTCG GTCGCCACCG TCCACCAGGC CGACCGCCAG  ATCTCCAGCG AGCTCTACGC GGCGCAGAGT TGCGATGTCA TTGACTACGA GCTCGTCAAG GCCGACCTGC TGCACCTGAT GACGGACTCG CAGGACTTCT GGCCCGCCGA CTTCGGCCAC  TACGGCGGTC TCTTCATCCG CCTGGCATGG CACTGCAACG GCTCGTACCG CCGCGCCGAC GGCCGCGGAG GCTGCGACGG CGGCCGCATC CGCTTTAACC CGGAGCGCAG CTGGGCCGAC  AACACCAACC TGGACAAGGC GCTCGACCTG CTGGAGCCCA TCAAGCTCAA GTACGGCGAC GCCCTGTCGT GGGGCGATCT CATCGTGCTG TCCGGCGACG TCGCCATCGA GAGCATGGGT  GGCCCCGTGC TCGGCTTCTG CGGTGGTCGC CGCGACGATG TCGACGGGAC GAGCAGCTTG CAGCTGGGTC CGACGCCCGA GCAGGAGAGC GTGGCGCCAT GCGAGGTCGA CGGTCAGTGC  AAGGAGCCTT TGGGCCCCAC CACCATGGGT CTCATCTACG TGAACCCGGA GGGTCCCATG GGTAACCCCG ACCCGGTTGG ATCGGTGGCC GACGTGCGCG ACACCTTCGA GCGTATGGGC  ATGAACGACC GCGAGACGGT GGCGCTGATC GGTGGCGGCC ACGCCTTCGG CAAGACGCAC GGCGCGTGCC CAACGGGCCC CGGCCCCGAT CCGACGCAGG ACCCCCTGAA CCCCTGGGCT  GGAACGTGCG GTGAGGGTGC GCTCAAGGGC AAGGGCAACA ACACCTTCAC GAGCGGCTTC GAAGGCGCAT GGACATTCAC GCCCACCAAG TGGGGCAACG GCTACTTCAA GGGTCTCACC  GGCTTCGAGT GGGAGAAGTT CGACGGTCCG GGCGGTCACG TGCAGTGGCG CCCCGTGCCG GACACGACGC CGCCCGTGCG CATGCTGACG GCCGACATTG CTCTGCTGCA CGACGAGAGC  TACCATAACA TCTCGCTCGA GTTCGCTGCC AACCAGACTG CTCTGGATGA GGCGTTCTCG CACGCCTGGT ACAAGCTGAT GTCGCGCGAC GTGGGTCCGG TAGCTCGTTG CCGTGGTAAC  GACGTGCCAC CCGCTCAGCC GTTCCAGAAC CCGCTGCCGC CGACGCCCGC CTCGCTGTCG GACTTCGACG CCGTGCGCTC GGACATCCGT TCGCTGTTGA CGAAGTCGGT GGACGGCCTG  ACGAGCGACG CCAGCAACGA CGGCACGCCG TACAACGGCG CTCTGTTCGT GCATGCAGCG TGGCAGTGTG CGTCGACGTT CCGCATCACG GACTACGCTG GCGGTTGCAA CGGGGCCCGC  ATCCGCTTCT CGCCCGAGAA GGACTGGCCG GTGAACGCTG GTGTGGACAA GATCATTGCC GCTCTGGAGC CCGTGAAGGA GTCGTACCCG ACGTTGTCGA CGGCTGACTT GATCGTGCTG  GCTGGGCAAG TGGCCCTGGA GGACGCTGGC AACGTGACCA TCGACTTCTT GGGAGGTCGT ACAGACGCCG AGAACGGCAA CGGCACGGAG ATTCTGGCCC CTCGCGAGTA CTACAACACG  ACTTTGATCG CTGTGCGCGA CAACATCAAG ATCCTCGGTG TGTCACCGGT CGAGGCGGTG GCTCTGGCTG GTCGCCCGCG CAGTGTGGAG CAGCAGAAGG TGCTGGGCTA CAGCGGCTCG  TACAGCAACA ACTCGCTCAC TCTGTCGAAC GAGTACTTCC AGGTGCTCCT GAACGAGACG TGGACGGAAG TGTCGGAGAA GGAGTTCAAG GCGGAAGGCA AGGACGTGTA CATGATGGAC  ACGGATCTGG CTCTGCTGGC GGCACCCGAA CTGAAGGAGG CGGTGCAGCT GTTCGCGTCG GAGGAGACCG TCTTCAAGCA CGTCTTCTCT TCGGCCTGGG CCAAGGTCAT GACCGCCGAC 
CACTTTAACG CTAGCAGCTA CTAA 

Retrieve as FASTA