Entry information : CcasGPx01
Entry ID 10070
Creation 2012-01-04 (Passaia Gisèle)
Last sequence changes 2012-01-04 (Passaia Gisèle)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-23 (Catherine Mathe (Scipio))
Peroxidase information: CcasGPx01
Name CcasGPx01
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3001]
Taxonomy Eukaryota Fungi Ascomycota Saccharomycetes Candida
Organism Candida caseinolytica    [TaxId: 51930 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CcasGPx01
start..stop
S start..stop
ArubGPx03 261 2e-91 1..159 1..159
VpolGPx01 252 7e-88 1..159 1..159
SmiGPx02 248 3e-86 1..159 1..159
KaesGPx01 248 5e-86 1..159 1..159
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1743295..1743771 477  
complement(join(1743295..1743771))


exon

Literature and cross-references CcasGPx01
DNA ref. JGI genome:   scaffold_1 (1743771..1743295)
Protein sequence: CcasGPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   160
PWM (Da):   %s   17969.3  
PI (pH):   %s   8.43
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSSFYDLKPL DKTGQPYDFA QLKGKVVLIV NVASKCGFTP QYKGLEELYQ KYRDRGLVII GFPCNQFAKQ EPGTDEEIAS FCSLNYGVDF PIMKKIDVNG DNTDPVYKFL KSKKSGLLGF 
KGIKWNFEKF LVDKNGEVVG RFSSVKTPES LEPEIEKLL* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (scaffold_1:1743008-1743877 (-), no intron) NO EST. Strain \\\\\\\"Y-17796\\\\\\\".
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCATCAT TTTACGACCT GAAACCTCTC GACAAGACTG GTCAACCTTA TGACTTCGCA CAATTGAAGG GCAAAGTTGT TCTCATTGTG AATGTCGCTT CGAAGTGCGG TTTCACTCCC  CAGTACAAGG GCTTAGAGGA GCTTTATCAG AAGTATCGGG ATCGCGGACT CGTGATTATT GGGTTCCCAT GCAATCAATT CGCTAAACAG GAACCTGGCA CAGACGAAGA GATTGCGTCT  TTCTGTTCTC TCAACTATGG CGTCGACTTC CCGATCATGA AGAAGATCGA CGTCAATGGC GACAACACCG ACCCTGTTTA CAAGTTCCTG AAATCGAAGA AGTCTGGGCT GCTTGGCTTC 
AAGGGTATCA AATGGAACTT TGAGAAGTTC TTGGTCGACA AGAATGGCGA GGTTGTTGGA CGTTTCAGTA GCGTCAAGAC ACCTGAGTCT CTTGAACCTG AGATCGAGAA GTTGTTG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCATCAT TTTACGACCT GAAACCTCTC GACAAGACTG GTCAACCTTA TGACTTCGCA CAATTGAAGG GCAAAGTTGT TCTCATTGTG AATGTCGCTT CGAAGTGCGG TTTCACTCCC  CAGTACAAGG GCTTAGAGGA GCTTTATCAG AAGTATCGGG ATCGCGGACT CGTGATTATT GGGTTCCCAT GCAATCAATT CGCTAAACAG GAACCTGGCA CAGACGAAGA GATTGCGTCT  TTCTGTTCTC TCAACTATGG CGTCGACTTC CCGATCATGA AGAAGATCGA CGTCAATGGC GACAACACCG ACCCTGTTTA CAAGTTCCTG AAATCGAAGA AGTCTGGGCT GCTTGGCTTC 
AAGGGTATCA AATGGAACTT TGAGAAGTTC TTGGTCGACA AGAATGGCGA GGTTGTTGGA CGTTTCAGTA GCGTCAAGAC ACCTGAGTCT CTTGAACCTG AGATCGAGAA GTTGTTG 

Retrieve as FASTA