Entry information : GtraGPx01
Entry ID 10076
Creation 2012-01-04 (Passaia Gisèle)
Last sequence changes 2012-01-04 (Passaia Gisèle)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-02-29 (Christophe Dunand)
Peroxidase information: GtraGPx01
Name GtraGPx01
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Gloeophyllaceae Gloeophyllum
Organism Gloeophyllum trabeum    [TaxId: 104355 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GtraGPx01
start..stop
S start..stop
NlepGPx01 331 4e-117 1..220 1..216
PstrGPx01 309 5e-108 49..220 87..254
PplGPx02 295 2e-102 22..220 37..236
PplGPx01 293 5e-102 22..220 38..237
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1369495..1369784 290 N° 2 1369842..1369864 23 N° 3 1369917..1369984 68 N° 4 1370044..1370217 174
N° 5 1370276..1370383 108  
join(1369495..1369784,1369842..1369864,1369917..1369984,1370044..1370217,1370276 ..1370383)


exon

Literature and cross-references GtraGPx01
DNA ref. JGI genome:   scaffold_00012 (1369495..1370383)
Protein sequence: GtraGPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   221
PWM (Da):   %s   24712.89  
PI (pH):   %s   10.17
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MNRRLPWVSSFINRSRYSVGNLALRSFARHIAPRRLPSIHLPASLLYSRTIATARDSEPKMVESFYELKAEMPGGKVYDFADLKGKVVLIVNTASQCGFTPQYGLQKLYEKFKDKGFVILGFPCNFGGQEPGDDKAISEFCTLNHGVTFPLMKKSDVNGDNTNEVFKWLKSQKAGILGLTRIKWNFEKFLIDKNGNVVSRWASTTSPDAIDAEVAKLL*

Retrieve as FASTA  
Remarks Complete sequence from genomic (scaffold_00012, 4 introns). No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAATCGCCGGTTACCTTGGGTATCGTCATTTATCAACAGATCGCGGTACTCTGTCGGTAATCTTGCTCTCCGCTCGTTTGCGAGACATATTGCGCCCCGTCGTCTACCGTCCATACAC
TTGCCTGCCAGCTTACTTTACTCAAGAACAATCGCTACCGCAAGAGATTCCGAACCGAAAATGGTTGAATCATTCTACGAACTGAAGGCGGAGATGCCCGGAGGGAAAGTGTACGATTTC
GCCGATCTGAAAGGAAAGGTCGTGCTCATTGTGAATACCGCCTCCCAATG
GTGCGTATTGCACCCGTAGCGCATCCTTAATTGTGTTGCATCTCATACCTTACGTAGTGGATTTACACCC
CAGTACAAGG
GTACGTGTGGTCGCAAGGTCATTAAAGGCTGCGATGAATCGATAGGCGCCAGGCTTGCAGAAGCTGTACGAGAAGTTCAAGGACAAGGGCTTCGTGATCCTAGGGTTCCC
CTGCAATCAG
GTATGCCTGCTCCGTCACACGATGCATGATTCAGCTTATATTAGTGCAACCCCGGCTAGTTTGGCGGACAAGAGCCCGGTGACGACAAGGCTATCTCAGAATTCTGCACT
TTAAACCATGGCGTTACGTTCCCTTTGATGAAGAAATCAGATGTTAATGGCGACAATACCAATGAAGTCTTTAAGTGGCTCAAGTCCCAGAAGGCTGGTATCCTTGGGTTGACCAGGATC
AAG
GTGCGCAGCGCCCCATTGAATTCGAGAGTCCAACGGTGCTGACACATGGGACGAAAAGTGGAACTTCGAGAAGTTCTTGATTGACAAGAATGGCAACGTCGTCAGTCGCTGGGCTTC
GACTACCTCCCCTGATGCCATTGACGCAGAAGTTGCTAAGCTGTTGTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAATCGCCGGTTACCTTGGGTATCGTCATTTATCAACAGATCGCGGTACTCTGTCGGTAATCTTGCTCTCCGCTCGTTTGCGAGACATATTGCGCCCCGTCGTCTACCGTCCATACAC
TTGCCTGCCAGCTTACTTTACTCAAGAACAATCGCTACCGCAAGAGATTCCGAACCGAAAATGGTTGAATCATTCTACGAACTGAAGGCGGAGATGCCCGGAGGGAAAGTGTACGATTTC
GCCGATCTGAAAGGAAAGGTCGTGCTCATTGTGAATACCGCCTCCCAATG
TGGATTTACACCCCAGTACAAGGGCTTGCAGAAGCTGTACGAGAAGTTCAAGGACAAGGGCTTCGTGATC
CTAGGGTTCCCCTGCAATCAG
TTTGGCGGACAAGAGCCCGGTGACGACAAGGCTATCTCAGAATTCTGCACTTTAAACCATGGCGTTACGTTCCCTTTGATGAAGAAATCAGATGTTAAT
GGCGACAATACCAATGAAGTCTTTAAGTGGCTCAAGTCCCAGAAGGCTGGTATCCTTGGGTTGACCAGGATCAAG
TGGAACTTCGAGAAGTTCTTGATTGACAAGAATGGCAACGTCGTC
AGTCGCTGGGCTTCGACTACCTCCCCTGATGCCATTGACGCAGAAGTTGCTAAGCTGTTGTGA

Retrieve as FASTA