Entry information : PtanGPx01
Entry ID 10093
Creation 2012-01-05 (Passaia Gisèle)
Last sequence changes 2012-05-30 (Catherine Mathe)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-12-23 (Christophe Dunand)
Peroxidase information: PtanGPx01
Name PtanGPx01
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3001]
Taxonomy Eukaryota Fungi Ascomycota Saccharomycetes Saccharomycetaceae Pachysolen
Organism Pachysolen tannophilus    [TaxId: 4918 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtanGPx01
start..stop
S start..stop
PpasGPx01 237 7e-82 1..161 1..161
AgoGPx 237 4e-81 1..159 27..185
WanoGPx02 234 9e-81 1..159 1..159
SkluGPx01 234 1e-80 1..160 12..171
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1155993..1156478 486  
complement(join(1155993..1156478))


exon

Literature and cross-references PtanGPx01
DNA ref. JGI genome:   scaffold_2 (1156478..1155993)
Protein sequence: PtanGPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   162
PWM (Da):   %s   18491.5  
PI (pH):   %s   8.15
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSKFYELSAL DQKDQPFSFE QLKGKVVLIV NVASKCGFTP QYKELEQLYG KYKDQGFIIL GFPTSEFANQ EFENQEEIQN FCQLNYGVTF PIMKKTKVNG AEANSVYQYL KSQKAGILGF 
RGIKWNFEKF LIDKEGNVVQ RYSSITTPLS FESTIKELLA K* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (scaffold_2, no intron). Strain="NRRL Y-2460".
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCGAAAT TTTATGAATT GTCTGCTTTA GATCAAAAGG ACCAACCGTT TTCTTTTGAA CAATTAAAGG GTAAAGTTGT ATTAATTGTT AACGTTGCAT CAAAATGTGG GTTTACACCA  CAATATAAGG AATTAGAACA ATTATATGGT AAATATAAAG ATCAAGGTTT TATTATTTTG GGGTTCCCAA CTTCGGAATT TGCTAATCAA GAATTTGAAA ATCAGGAAGA AATTCAAAAT  TTTTGTCAAT TAAATTATGG TGTTACTTTC CCTATTATGA AGAAAACTAA AGTTAATGGT GCTGAAGCTA ATTCAGTTTA TCAATATTTA AAATCTCAAA AAGCTGGTAT CTTGGGTTTC  AGAGGTATTA AATGGAATTT TGAAAAATTC CTTATTGATA AAGAAGGAAA TGTCGTTCAA AGATATTCAT CAATTACTAC TCCTTTATCT TTTGAATCAA CTATCAAGGA ATTGTTAGCA 
AAATAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCGAAAT TTTATGAATT GTCTGCTTTA GATCAAAAGG ACCAACCGTT TTCTTTTGAA CAATTAAAGG GTAAAGTTGT ATTAATTGTT AACGTTGCAT CAAAATGTGG GTTTACACCA  CAATATAAGG AATTAGAACA ATTATATGGT AAATATAAAG ATCAAGGTTT TATTATTTTG GGGTTCCCAA CTTCGGAATT TGCTAATCAA GAATTTGAAA ATCAGGAAGA AATTCAAAAT  TTTTGTCAAT TAAATTATGG TGTTACTTTC CCTATTATGA AGAAAACTAA AGTTAATGGT GCTGAAGCTA ATTCAGTTTA TCAATATTTA AAATCTCAAA AAGCTGGTAT CTTGGGTTTC  AGAGGTATTA AATGGAATTT TGAAAAATTC CTTATTGATA AAGAAGGAAA TGTCGTTCAA AGATATTCAT CAATTACTAC TCCTTTATCT TTTGAATCAA CTATCAAGGA ATTGTTAGCA 
AAATAA 

Retrieve as FASTA