Entry information : PmemGPx01
Entry ID 10094
Creation 2012-01-05 (Passaia Gisèle)
Last sequence changes 2012-01-05 (Passaia Gisèle)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-27 (Catherine Mathe (Scipio))
Peroxidase information: PmemGPx01
Name PmemGPx01
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3001]
Taxonomy Eukaryota Fungi Ascomycota Saccharomycetes Saccharomycetaceae Pichia
Organism Pichia membranifaciens (Candida valida)    [TaxId: 4926 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PmemGPx01
start..stop
S start..stop
HburGPx01 237 1e-81 24..183 1..160
PangGPx01 237 2e-81 24..184 1..161
SkluGPx01 235 1e-80 22..182 10..170
SpastGPx02 235 1e-80 24..184 1..161
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1514953..1515504 552  
join(1514953..1515504)


exon

Literature and cross-references PmemGPx01
DNA ref. JGI genome:   scaffold_2 (1514953..1515504)
Protein sequence: PmemGPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   185
PWM (Da):   %s   20346.38  
PI (pH):   %s   8.75
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MQRSVATATR AFSATAAKPS TSIMSKFYSF TATANNGTPF PLADLKGKVV LVVNTASKCG FTKQYADLEE LYKKYHEQGL EVVGFPCNQF AGQEPGSSEE IAQFCKLNYG VSFPIMQKID 
VNGDKEDPLY AWLKAEKPGL LGFKGIKWNF EKFLVDKEGN VYQRYSSIKN PASLSGDVEL LLKK* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (scaffold_2:1515022-1515507 (+), No intron) No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAGAGAA GCGTAGCCAC AGCCACACGA GCATTCTCAG CAACAGCAGC AAAGCCAAGC ACCAGCATCA TGTCCAAATT CTACAGCTTC ACGGCCACCG CCAACAACGG CACGCCCTTC  CCGCTCGCGG ACCTCAAGGG CAAGGTTGTG CTCGTGGTGA ACACGGCGTC CAAATGCGGC TTCACCAAGC AGTACGCAGA CTTGGAGGAG CTCTACAAGA AGTACCACGA GCAGGGGCTC  GAGGTGGTGG GGTTCCCCTG CAACCAGTTT GCCGGGCAGG AGCCCGGCTC GTCGGAGGAG ATTGCGCAGT TCTGCAAGCT CAACTACGGC GTCAGCTTCC CCATCATGCA GAAGATCGAC  GTGAACGGCG ACAAGGAGGA CCCGCTGTAC GCGTGGTTGA AGGCCGAGAA GCCCGGGCTC CTTGGCTTCA AGGGCATCAA GTGGAACTTC GAGAAGTTTC TTGTGGACAA GGAGGGCAAT 
GTGTACCAGC GCTACTCGAG CATTAAGAAC CCGGCCTCGC TTTCGGGCGA CGTGGAGCTC TTGCTCAAGA AG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAGAGAA GCGTAGCCAC AGCCACACGA GCATTCTCAG CAACAGCAGC AAAGCCAAGC ACCAGCATCA TGTCCAAATT CTACAGCTTC ACGGCCACCG CCAACAACGG CACGCCCTTC  CCGCTCGCGG ACCTCAAGGG CAAGGTTGTG CTCGTGGTGA ACACGGCGTC CAAATGCGGC TTCACCAAGC AGTACGCAGA CTTGGAGGAG CTCTACAAGA AGTACCACGA GCAGGGGCTC  GAGGTGGTGG GGTTCCCCTG CAACCAGTTT GCCGGGCAGG AGCCCGGCTC GTCGGAGGAG ATTGCGCAGT TCTGCAAGCT CAACTACGGC GTCAGCTTCC CCATCATGCA GAAGATCGAC  GTGAACGGCG ACAAGGAGGA CCCGCTGTAC GCGTGGTTGA AGGCCGAGAA GCCCGGGCTC CTTGGCTTCA AGGGCATCAA GTGGAACTTC GAGAAGTTTC TTGTGGACAA GGAGGGCAAT 
GTGTACCAGC GCTACTCGAG CATTAAGAAC CCGGCCTCGC TTTCGGGCGA CGTGGAGCTC TTGCTCAAGA AG 

Retrieve as FASTA