Entry information : SpasGPx01
Entry ID 10099
Creation 2012-01-05 (Passaia Gisèle)
Last sequence changes 2012-01-05 (Passaia Gisèle)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-27 (Catherine Mathe (Scipio))
Peroxidase information: SpasGPx01
Name SpasGPx01
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3003]
Taxonomy Eukaryota Fungi Ascomycota Saccharomycetes Spathaspora
Organism Spathaspora passalidarum (Candida sp)    [TaxId: 340170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpasGPx01
start..stop
S start..stop
CduGPx04 231 2e-79 9..168 9..171
CparaGPx02 224 6e-76 9..168 30..189
CtanzGPx01 211 5e-71 9..168 15..174
ScaGPx02 195 4e-65 9..168 2..161
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1398164..1398676 513  
complement(join(1398164..1398676))


exon

Literature and cross-references SpasGPx01
DNA ref. JGI genome:   scaffold_1 (1398676..1398164)
Protein sequence: SpasGPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   171
PWM (Da):   %s   19742.91  
PI (pH):   %s   8.07
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MNKTIRHPSQ FYSFVIPDGN NNNIDFNQFR NKVVIIVNVA SLCGYTPQYK ELQQLYEKYH DRGLEILGFP CNQFGNQEPG DESNIASFCQ RHFGVTFPIM KKVYVNGDDE HELYTYLKGQ 
VKGVLGFRGV RWNFEKFIVN RDGQTVARFT SIITPLQFET YIVTLLNQHS * 

Retrieve as FASTA  
Remarks Complete sequence from genomic (scaffold_1:1398164-1398676 (-), No intron) No EST. Strain="NRRL Y-27907".
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAACAAAA CCATACGACA TCCATCTCAG TTTTACTCGT TTGTTATTCC TGATGGAAAC AACAACAACA TAGATTTTAA CCAATTCAGA AACAAAGTCG TCATAATAGT CAACGTGGCA  AGTCTTTGCG GGTACACACC ACAATACAAA GAACTACAAC AGCTATACGA AAAGTATCAC GATCGGGGTT TGGAGATCTT GGGATTCCCA TGCAATCAAT TTGGGAATCA AGAACCAGGC  GACGAATCAA ACATTGCAAG TTTCTGTCAG CGTCATTTCG GTGTTACTTT CCCCATTATG AAGAAAGTAT ATGTCAATGG TGACGATGAA CACGAATTAT ACACGTATTT AAAAGGACAG  GTCAAGGGTG TGCTAGGATT CCGTGGCGTG CGATGGAATT TTGAAAAGTT TATCGTCAAT AGAGATGGCC AAACCGTAGC AAGATTTACT TCCATTATAA CACCATTACA GTTTGAAACT 
TACATTGTAA CACTATTAAA CCAGCATAGC TAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAACAAAA CCATACGACA TCCATCTCAG TTTTACTCGT TTGTTATTCC TGATGGAAAC AACAACAACA TAGATTTTAA CCAATTCAGA AACAAAGTCG TCATAATAGT CAACGTGGCA  AGTCTTTGCG GGTACACACC ACAATACAAA GAACTACAAC AGCTATACGA AAAGTATCAC GATCGGGGTT TGGAGATCTT GGGATTCCCA TGCAATCAAT TTGGGAATCA AGAACCAGGC  GACGAATCAA ACATTGCAAG TTTCTGTCAG CGTCATTTCG GTGTTACTTT CCCCATTATG AAGAAAGTAT ATGTCAATGG TGACGATGAA CACGAATTAT ACACGTATTT AAAAGGACAG  GTCAAGGGTG TGCTAGGATT CCGTGGCGTG CGATGGAATT TTGAAAAGTT TATCGTCAAT AGAGATGGCC AAACCGTAGC AAGATTTACT TCCATTATAA CACCATTACA GTTTGAAACT 
TACATTGTAA CACTATTAAA CCAGCATAGC TAA 

Retrieve as FASTA