Entry information : LsalCP[P]02
Entry ID 10144
Creation 2012-01-18 (Christophe Dunand)
Last sequence changes 2012-01-18 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2012-01-19 (Christophe Dunand)
Peroxidase information: LsalCP[P]02
Name LsalCP[P]02
Class Catalase peroxidase     [Orthogroup: CP001]*
Taxonomy Eukaryota Metazoa Arthropoda Maxillopoda Caligidae Lepeophtheirus
Organism Lepeophtheirus salmonis    [TaxId: 72036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsalCP[P]02
start..stop
S start..stop
SpliCP01 1078 0 1..717 26..749
CatCP01 1061 0 3..716 24..740
BBFL7CP02 1053 0 3..716 25..745
DhaCP01_Y51 1031 0 1..717 8..730
Literature and cross-references LsalCP[P]02
DNA ref. GenBank:   ADND02051286.1 (4101..1950)
Protein sequence: LsalCP[P]02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   717
PWM (Da):   %s   78010.69  
PI (pH):   %s   5.58
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSGAAQSKNA GGGTTNRDWW PNALKLNILR QNSNLSDPMD ADFDYAKEFK SLDYKALKKD LVALMTDSQD WWPADYGHYG GFFIRMTWHA AGTYRVTDGR GGGNTGNQRF APLNSWPDNG  NLDKARLLLW PIKQKYGNKI SWADLFILTG NVALESMGFK TFGFAGGRPD IWQPEEDIYW GPETEWLGDK RYSGERELAN PLGAVQMGLI YVNPEGPNGN PDPLKSAFDV RDTFGRMAMD  DEETVALVAG GHTFGKAHGA ADPDKYVGRE PEGASMEEQG LGWKNSYGTG HGGDTITSGI EGAWTPNPVQ WDHDYFDVLL NYDWELTKSP AGANQWKPTA ASKARMAPAA HDATKQENLL  MTTADMALKM DPDYLKISKD FHANPKKFED AFARAWFKLT HRDMGPRDRY LGSEVPKEVL VWQDPIPANK NKELGKKDVA SLKKQILASG LTVSQLVSAA WASASTYRGS DMRGGANGAR  VRLAPQNGWE ANNPGQLAKV LNVLEGIQKD FKKVSMADLI VLGGCAAIEK AAKDAGHDIT VPFTGGRGDA TQEHTDxxxx xxLEPKADGF RNFANYHTSS SAEELLVDKA QLLTLTAPEM 
TVLVGGMRAL NANSGGSQHG VFTKRPGVLT NDFFVNLLDI RTTWKAVSKA DDVFEGRDRT SGELKWLGSR VDLIFGSNSE LRALAEVYGM GDSEEKFVKD FVAAWDKVMN LDRFDLA 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron). Probable frame shift due to missing residues
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGCGGTG CAGCACAAAG CAAAAATGCT GGCGGCGGCA CAACAAACCG TGACTGGTGG CCAAACGCTT TGAAATTAAA TATTTTGCGT CAAAATTCAA ATCTGTCTGA CCCAATGGAT  GCAGATTTTG ATTACGCAAA GGAGTTTAAA TCATTAGACT ACAAAGCTTT GAAAAAAGAC TTGGTAGCCT TAATGACAGA CTCGCAAGAT TGGTGGCCAG CAGATTACGG ACACTATGGA  GGTTTCTTCA TTCGTATGAC ATGGCACGCA GCGGGTACTT ACCGTGTTAC TGACGGTCGT GGTGGTGGAA ACACTGGAAA TCAACGTTTT GCGCCATTAA ACTCTTGGCC AGATAATGGT  AACTTGGATA AAGCGCGTTT ATTGTTGTGG CCAATCAAGC AAAAATACGG CAATAAAATA TCTTGGGCGG ATTTATTCAT TTTGACAGGA AACGTGGCTT TGGAATCTAT GGGTTTCAAA  ACATTCGGTT TCGCAGGTGG ACGTCCTGAC ATTTGGCAGC CAGAAGAAGA TATTTACTGG GGACCTGAGA CAGAATGGTT GGGTGACAAA CGTTACTCAG GTGAGCGTGA ATTGGCTAAT  CCATTAGGAG CAGTTCAAAT GGGATTGATT TACGTTAATC CAGAAGGACC AAACGGTAAT CCTGACCCAT TAAAGTCTGC ATTTGATGTA CGTGATACTT TCGGTCGTAT GGCAATGGAT  GATGAAGAAA CAGTTGCTTT GGTAGCTGGT GGACACACAT TTGGTAAGGC GCACGGTGCG GCAGACCCTG ACAAGTACGT CGGTAGAGAG CCAGAGGGCG CAAGTATGGA GGAGCAAGGT  TTGGGTTGGA AAAATAGCTA TGGCACAGGT CATGGTGGAG ATACAATCAC AAGTGGTATC GAAGGTGCAT GGACACCAAA CCCCGTACAA TGGGACCACG ATTACTTTGA TGTATTGTTG  AACTATGACT GGGAATTGAC GAAAAGTCCA GCAGGTGCTA ACCAATGGAA GCCAACAGCA GCTTCAAAAG CACGTATGGC ACCAGCCGCA CACGATGCAA CTAAGCAGGA AAATCTATTG  ATGACGACCG CGGATATGGC ATTGAAAATG GATCCAGATT ACTTGAAAAT TTCGAAAGAT TTTCACGCTA ATCCAAAGAA ATTTGAAGAT GCATTTGCAC GCGCTTGGTT CAAGTTGACA  CACCGTGATA TGGGACCTCG CGACCGTTAT TTAGGTTCAG AAGTGCCAAA AGAAGTGTTG GTATGGCAAG ACCCAATTCC AGCAAACAAG AACAAAGAAT TAGGCAAGAA AGACGTAGCG  TCTTTGAAAA AACAGATTTT GGCTTCGGGC TTAACTGTTT CTCAATTGGT ATCTGCGGCT TGGGCTTCTG CTTCGACTTA TCGTGGTTCT GATATGCGTG GTGGTGCAAA TGGCGCACGT  GTACGTTTAG CTCCACAGAA TGGCTGGGAA GCAAACAATC CAGGTCAATT GGCTAAGGTA TTGAATGTAT TAGAAGGCAT TCAGAAGGAC TTTAAGAAAG TTTCCATGGC AGATTTAATC  GTATTGGGTG GCTGTGCAGC TATCGAAAAA GCGGCTAAAG ATGCAGGACA TGATATTACT GTTCCTTTCA CTGGTGGTCG TGGTGATGCG ACGCAAGAGC ATACGGATGT TGATTCTTnA  TTGGTTAGAG CCAAAAGCGG ACGGTTTCCG TAATTTCGCG AATTATCATA CTTCAAGTTC AGCGGAAGAA TTATTAGTAG ATAAAGCACA ATTATTGACT TTGACAGCTC CAGAAATGAC  TGTTTTAGTT GGTGGTATGC GTGCCTTGAA TGCAAACAGT GGTGGTTCAC AGCACGGTGT ATTCACAAAA CGCCCAGGTG TTTTGACGAA TGATTTCTTT GTGAACTTAT TGGATATTCG  TACGACTTGG AAAGCAGTTT CTAAGGCAGA TGATGTATTT GAAGGTCGCG ACCGTACGTC TGGTGAACTT AAGTGGTTGG GTAGCCGTGT CGATTTGATT TTTGGTTCTA ACTCTGAGTT 
ACGCGCTTTA GCTGAGGTTT ATGGAATGGG AGATTCTGAG GAGAAATTCG TTAAGGATTT CGTGGCAGCA TGGGATAAAG TGATGAATTT AGACCGTTTT GATTTGGCTT AG 

Retrieve as FASTA