Entry information : EgrKat03(Eucgr.F03557 / Egrandis_v1_0.010988m)
Entry ID 10161
Creation 2012-01-25 (Qiang Li)
Last sequence changes 2012-01-25 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-02-13 (Christophe Dunand)
Peroxidase information: EgrKat03(Eucgr.F03557 / Egrandis_v1_0.010988m)
Name EgrKat03(Eucgr.F03557 / Egrandis_v1_0.010988m)
Class Catalase    [Orthogroup: Kat001]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrKat03
start..stop
S start..stop
EcamKat03 977 0 5..492 1..488
VvKat02 976 0 1..492 1..492
PtKat01 969 0 1..492 1..492
PpeKat01 969 0 1..492 1..492
Literature and cross-references EgrKat03(Eucgr.F03557 / Egrandis_v1_0.010988m)
DNA ref. Phytozome 12:   scaffold_6 (44082107..44086350)
EST ref. GenBank:   HO763979.1
Protein sequence: EgrKat03(Eucgr.F03557 / Egrandis_v1_0.010988m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   492
PWM (Da):   %s   56904.42  
PI (pH):   %s   7.29
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MDPHKYRPSS AFNTSFWTTN SGAPVWNNNS SLTVGSRGPI LLEDYHLVEK LANFDRERIP ERVVHARGAS AKGFFEVTHD ISQLTCADFL RAPGVQTPVI VRFSTVIHER GSPETLRDPR  GFAVKFYTRE GNFDLVGNNF PVFFVRDGMK FPDMVHALKP NPKSHIQENW RIVDFFSHHP ESLHMFTFLF DDIGIPQDYR HMEGSGVNTY TLINKAGKVH YVKFHWKPTC GVKNLLEEEA  IRVGGSNHSH ATQDLYDSIA AGNYPEWKLF IQIIDPDHED KFDFDPLDVT KTWPEDILPL MPVGRLVLNR NIDNFFAENE QLAFCPSIVV PGVFYSDDKL LQTRIFSYSD TQRHRLGPNY  LQLPPNAPKC AHHNNHHEGF MNFMHRDEEI NYFPSRYDPV RHAERYPIPT AMLTGKREKT IIEKENNFKQ PGERYRSWTP DRQERFICRW VDALSDPRVT HEIRSVWISY WSQADKSLGQ 
KLASRLNVRP SI 

Retrieve as FASTA  
Remarks Complete sequence from genomic (7 introns, scaffold_6). Incorrect prediction from Phytozome (last exon is not correctly predicted => EST to confirmed
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGATCCGC ACAAGTACCG TCCATCCAGT GCTTTCAACA CTTCTTTCTG GACTACGAAC TCTGGTGCTC CTGTCTGGAA CAATAACTCT TCGTTGACTG TTGGAAGCAG AGGTCCAATT  CTTCTTGAGG ATTATCACCT TGTGGAGAAA CTTGCCAACT TTGATAGGGA GAGGATTCCA GAGCGTGTGG TGCATGCCAG AGGAGCCAGT GCAAAGGGAT TCTTTGAGGT CACTCATGAC  ATTTCCCAGC TTACCTGTGC TGATTTCCTT CGGGCACCAG GAGTTCAAAC ACCCGTGATT GTCCGTTTCT CCACTGTCAT CCACGAAAGG GGCAGCCCTG AAACCCTGAG GGACCCTCGA  GGTTTTGCTG TGAAGTTCTA CACAAGAGAG GGTAACTTTG ATCTGGTGGG AAACAATTTC CCTGTCTTCT TTGTCCGTGA TGGGATGAAA TTCCCGGATA TGGTTCATGC ACTTAAACCA  AACCCCAAAT CCCACATCCA GGAGAACTGG AGGATCGTTG ACTTTTTCTC CCACCATCCC GAGAGCTTGC ACATGTTCAC CTTCCTCTTT GATGATATTG GTATTCCCCA AGATTACAGG  CACATGGAGG GCTCTGGAGT TAACACCTAC ACCTTGATCA ACAAGGCCGG AAAAGTGCAT TATGTGAAGT TTCACTGGAA ACCAACTTGC GGGGTCAAGA ACTTGCTGGA GGAAGAGGCA  ATTAGAGTTG GGGGATCCAA TCACAGCCAT GCGACTCAGG ATCTTTATGA TTCCATTGCT GCTGGAAACT ATCCTGAATG GAAACTTTTC ATTCAGATCA TCGATCCTGA TCATGAAGAC  AAGTTTGACT TTGACCCACT TGATGTGACT AAGACCTGGC CCGAAGATAT ATTGCCCCTA ATGCCAGTTG GCCGCTTGGT CTTGAATAGG AACATTGATA ACTTCTTTGC TGAGAATGAA  CAGCTTGCAT TTTGCCCTTC AATTGTGGTT CCTGGGGTCT TCTACTCAGA TGATAAGCTG CTCCAAACTC GTATCTTCTC GTATTCTGAT ACTCAGAGGC ACCGTCTTGG ACCAAATTAT  CTTCAACTCC CCCCCAATGC TCCTAAATGT GCTCATCACA ACAATCACCA TGAAGGTTTC ATGAATTTCA TGCATAGGGA TGAAGAGATA AACTATTTTC CATCAAGGTA CGATCCTGTT  CGTCATGCAG AGAGATATCC CATTCCAACT GCTATGCTGA CTGGAAAGCG TGAAAAGACC ATCATTGAGA AAGAGAACAA CTTCAAGCAG CCTGGAGAGA GATACCGATC ATGGACACCT  GACAGGCAAG AGCGGTTCAT CTGCCGATGG GTCGATGCTT TGTCTGACCC ACGCGTGACT CATGAGATCC GCAGCGTCTG GATTTCATAC TGGTCTCAGG CCGACAAATC TCTGGGTCAG 
AAATTAGCAT CTCGGCTCAA TGTGCGACCA AGCATTTAA 

Retrieve as FASTA