Entry information : EgrRboh05 ( Eucgr.J01662 / Egrandis_v1_0.001695m)
Entry ID 10174
Creation 2012-01-25 (Qiang Li)
Last sequence changes 2012-01-25 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-02-19 (Christophe Dunand)
Peroxidase information: EgrRboh05 ( Eucgr.J01662 / Egrandis_v1_0.001695m)
Name (synonym) EgrRboh05 ( Eucgr.J01662 / Egrandis_v1_0.001695m)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh001]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrRboh05
start..stop
S start..stop
EguRboh05 1981 0 1..967 1..967
EglRboh05 1857 0 1..967 1..940
PtRboh04 1454 0 19..967 14..926
VvRboh03 1444 0 18..967 5..924
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 21604947..21605628 682 N° 2 21604661..21604823 163 N° 3 21604481..21604529 49 N° 4 21604225..21604338 114
N° 5 21603616..21604041 426 N° 6 21602905..21603291 387 N° 7 21602701..21602796 96 N° 8 21602431..21602546 116
N° 9 21602214..21602316 103 N° 10 21602034..21602107 74 N° 11 21600941..21601524 584 N° 12 21600701..21600810 110
complement(join(21600701..21600810,21600941..21601524,21602034..21602107,2160221 4..21602316,21602431..21602546,21602701..21602796,21602905..21603291,21603616..2 1604041,21604225..21604338,21604481..21604529,21604661..21604823,21604947..21605 628))


exon

Literature and cross-references EgrRboh05 ( Eucgr.J01662 / Egrandis_v1_0.001695m)
DNA ref. Phytozome 11:   scaffold_10 (21605628..21600701)
Protein sequence: EgrRboh05 ( Eucgr.J01662 / Egrandis_v1_0.001695m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   967
PWM (Da):   %s   107811.08 Transmb domain:   %s   o395-414i535-557o577-599i759-776o
PI (pH):   %s   9.56
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRNEEIGMGTFNYSSDNNNSSDTESVGSDGRTAFSGPLGSALRSSKRGSRKSARFNIPAETAGLRSAGATSKDEQEDGDPYVEITLDIRDDGVAVHSVQAAGGATNFEDPELALLAKRTFETRRSSSFGSSVFRSTSSRFRQVSQELKRIASLTRRPTAPPARRFDRTRSAAAHALKGLKFIAAKTGGGGGGAGSAASGWPSVEKKFDQLTASSGGLLHCSQFCECIGMNKESKEFATELFRALAQRRNIFGDSITKDQLKEFWEQISDESFDSRLQTFFDMVDKDADGRIAEEEVRIITLSASANKLSNIQKQADEYAALIMEELDPDNKGYIMVQNLETLLLQAPNQSVRVGDSKVLSQLLSQKLKPTIDNNPVRRWCEHAKYFLMDNWKRLWVMVLWIAIMAGLFTYKFIQYRNRAAFGVMGYCVCVAKGGAETVKFNMALILLPVCRNTITWLRNKTRLSVAVPFDDNLNFHKVIAAGIAVGVGLHVISHLTCDFPRLLLASPEAYEPMKPYFGEKQPPNYWWFVKGVEGVTGILMLVLMAIAFTLAMPWFRRSKINVPGPLKKLTGFNAFWYSHHLFVIVYTLLIVHGIKLYLAHDWYKKTTWMYLAVPVTLYACERLIRAFRSSIKPVKILKVAVYPGNVLALHMSKPHGFKYRSGQYMFVNCSAVSPFEWHPFSITSSPGDDYLSVHIRTLGDWTRQLKSVFSVCQPPSVGKSGLLRADCVPGGSIPRFPKILIDGPYGAPAQDYQKYEVVLLVGLGIGATPMVSIVKDIINNIKVKENEQDHMGSLESGGRPVSPLTPDDSNSHYPKAGHRSSHGRGAFKTRKAYFYWVTREQGSFEWFKGIMDEVAGMDERQVIELHNYCTSVFEEGDARSALIAMLQTLNHAKHGVDVVSGTRVMSHFAKPNWRQVYKKIALHHPDKRGVFYCGAPALTKELNHLALDFSRKTSTKFDFHKENF

Retrieve as FASTA  
Remarks Complete sequence from genomic (scaffold_10, 11 introns). Correct prediction from phytozome.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGAAACGAAGAGATTGGGATGGGAACTTTTAACTATTCATCGGATAACAACAATAGTTCCGACACGGAAAGCGTCGGGAGCGACGGCCGCACAGCCTTCAGCGGGCCGCTCGGATCG
GCCCTTCGCAGCTCCAAGCGAGGCTCAAGAAAGAGCGCGAGATTCAACATCCCTGCGGAGACGGCGGGGCTCCGGAGTGCCGGCGCCACCTCGAAAGACGAGCAGGAAGATGGCGACCCG
TACGTCGAGATCACCCTCGACATACGGGACGACGGCGTCGCCGTCCACAGCGTGCAGGCCGCCGGCGGGGCGACCAACTTCGAGGACCCCGAGCTGGCGCTGCTCGCGAAGAGGACGTTC
GAGACCCGGAGGTCGTCGTCGTTTGGGTCGTCCGTCTTCCGGAGCACCTCGTCCCGTTTCCGGCAGGTCTCGCAGGAGCTGAAGCGCATCGCCTCCCTGACGCGGCGGCCGACGGCACCA
CCGGCGAGGCGCTTCGACCGGACGAGGTCGGCAGCGGCGCACGCGCTCAAGGGCCTCAAGTTCATAGCCGCCAAGACGGGCGGCGGCGGCGGCGGCGCTGGCTCCGCCGCCTCTGGGTGG
CCGTCGGTCGAGAAGAAATTCGACCAGTTGACCGCTTCGTCCGGCGGCCTCCTGCATTGTTCCCAGTTCTGTGAATGCATAG
GTAAATTAAAAATCCTGAAAATTACTCCCATTTTATTT
TTATTTTTTGGGTTGTTGCACTATAATTTGGTACCTCCTTTACAGCTCAATAATGTCTATTACGTCTGTAAATAATTGCAATTAGGAATGAACAAAGAGTCTAAGGAATTTGCGACCGAG
CTCTTTCGAGCACTCGCGCAGAGGCGCAACATATTTGGCGACTCCATCACCAAGGATCAGCTCAAGGAATTCTGGGAACAAATTAGCGACGAGAGCTTCGACTCGAGGCTGCAAACTTTC
TTCGACAT
GTAAGCAAGCAAAACGCTCTCGGCTAGTCTTAGATTTTATTTCCGTGTAGGTATTGAATAAGTTAATGTTATTATAAAAAGTTTTCTTGATTATTAAAAGCGAAATGGTTGG
TGGTGCAATAAAATGTTAGGGTGGACAAAGACGCGGATGGGAGAATCGCGGAGGAAGAAGTCAGAGAGGTATATAATTTTTTTCTCCCGTTCTTTGAAATACGTTGAAGGATTATGATTT
TTTTTTCTGTGAGTTAATTAATAAAAAGAAGTTGTCTGGACGTAGAATTGTTTAATTGTGTTGAAAGAGAATAAATCCTTGGTTTTGCAGATCATCACCCTGAGCGCATCGGCGAATAAG
CTGTCAAATATCCAGAAGCAAGCCGACGAATATGCAGCTCTCATCATGGAGGAATTGGACCCTGATAATAAGGGATACATCATG
GTATATATATATCATTAAACAATCGTTTATGTAATT
TGGACAAAAATTTGCACTTTTTACGAAATTTAACGTAGTCATCATCGGTATTAAATTAGGATCGCTATTGGAAAATGAGCTTTTTCACTAGCCACGTCTATGAAATAGCCATCCATGTGT
AACACGTTCTTGATTTGCCCTACACAGGTTCAGAACCTGGAAACACTGCTCTTGCAAGCTCCGAACCAGTCCGTGAGAGTCGGAGACAGCAAAGTCCTGAGCCAGCTACTGAGCCAGAAG
CTCAAACCGACCATCGACAACAACCCAGTCCGCCGATGGTGTGAGCACGCCAAGTACTTCCTGATGGACAACTGGAAGAGGCTGTGGGTCATGGTGCTGTGGATTGCGATCATGGCGGGC
CTCTTCACCTACAAGTTCATCCAGTACCGGAACAGGGCGGCATTCGGCGTGATGGGCTACTGCGTCTGTGTTGCCAAGGGCGGTGCCGAGACAGTCAAGTTCAACATGGCCCTCATCCTG
TTGCCCGTTTGTCGAAACACCATCACATGGCTTAGGAACAAGACCCGGTTGAGTGTTGCGGTCCCCTTCGACGACAACCTTAACTTTCACAAG
GTAATACGGCAGCGAGATGCTTTTATT
TCGATTGTTTTTATTACTGAGAATATCATTAATCTAATGAAATGAGAGACTCCACATAAGAATACTCATATAATTAAGCAATGGAAATATTTTGGGTATTATCTACTATTGTGTGTGATG
AAGTATACAATGAAATGTCAAGATTTTGCTTGCAATTCATACTCACATTTTGCTAATTGTAAATTACTATATCTTGTTAACTTCATCTGACTTTTGTTGCTCAAAATAATCTCGACTCCG
AGATCTTGATGAATAGCTTGATCTAATATCATATTCCCTATATGTGTACAATTCCAGGTGATCGCGGCAGGGATAGCTGTCGGGGTCGGGTTGCATGTAATCTCGCATTTGACGTGCGAC
TTCCCAAGGCTCCTACTCGCGAGCCCCGAGGCGTACGAGCCCATGAAGCCCTACTTCGGCGAGAAGCAGCCCCCGAACTACTGGTGGTTCGTGAAAGGAGTGGAGGGCGTGACGGGGATC
CTGATGCTGGTTCTGATGGCGATCGCCTTCACGCTGGCCATGCCGTGGTTCAGGAGGAGCAAGATCAACGTGCCCGGGCCCTTAAAGAAGCTCACGGGCTTCAACGCCTTCTGGTACTCG
CACCACCTCTTCGTCATCGTCTACACGCTGCTCATCGTCCACGGGATCAAGCTCTACCTCGCCCACGATTGGTACAAGAAGACG
GTAAGCTTCCTTCTCCCTCCTTCCAATTACTACAAA
TCTAGCCACAATTGTTGCTTCCAAGGCTATTCTTCCCTCTTTAATCACTGTTTCTTTTGACTATAATCGCAGACATGGATGTACTTGGCAGTGCCGGTGACCCTCTATGCGTGTGAAAGG
TTGATCCGGGCTTTCAGGTCCAGCATCAAGCCGGTGAAGATTCTCAAG
GTTATTATAATATAAACCCTGAACCAAACGGCCATATTTAATCTGCATATTTCTGATCATCGTCATCTGGAG
CATATAATTAACGAATAATCTATTCATTAGCCGATGAAGATGTCATGAATGTTGAATTAAAATTTGATGGGCATTCATGCAGGTGGCGGTTTACCCGGGGAATGTACTGGCACTGCACAT
GTCGAAGCCCCATGGGTTCAAGTACAGAAGTGGGCAATACATGTTCGTAAACTGCTCGGCTGTTTCTCCCTTTGAATG
GTATATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATA
TGACATTTGTGATGATCCACGATGTTTGAGCAATCATTGCTAGAGAAGATGCTAACGTTTAATTATGAGCAGGCACCCTTTCTCGATCACTTCGTCCCCGGGAGACGACTACCTCAGCGT
CCACATTCGGACATTGGGAGATTGGACAAGGCAACTGAAAAGCGTATTCTCGGAG
GTTGGTTGGATCGATTGATTAATCATGTCTAGTGGGGGATTCATAGTTCCAGAATTTCTGCGAGC
CATTTGATTATTGATTTGTTCTCCATTTTATGGACTGGTAGGTATGCCAACCTCCATCCGTTGGGAAAAGTGGACTGCTGAGAGCTGATTGCGTTCCAGGAGGAAGCATCCCACGGTAAG
ACTTTTTTCCTCGGTTGCACTAGCTTCAAAGAAAACAGACATTTTGATCTTGAAATAATCAACGGATTTTCCGAGATATACGGTGATCACACGGTGAGGAAATTGCCCAAAAGGTGCAAC
AATGAAATTGAAAATTGAACCTTTTCAGTTTCCGCTAGAGTTATCTTAAAGATGGTAGTTAAGGTTTACAGAAGTCAAGCCTCCGAACAATAGGAAACGATGCGTGGTCTAGCGAAATTC
CTTTAAAAAAAAAAAAAGACATACCAAATCCGTGATAGATCCAGAAGACGTAGAGCAAGACGGGGATTAATGAGACCCTAAAGTCCCGGTTGGTTTTATCCGATTTTTCCTTTAAGGCGC
CACCAATCATTGTTGGAAAGGATAGTTGCATAATCAATTTCAAACATGTATTATTATTATTATTTTTTTTTTTGACAATCAAACATGTATTATTGAATGCTTAGTAGAGCCATGATTGAT
TGTCCTTTTCCCAATGCGTTACAGCTTCCCAAAGATACTGATAGACGGTCCATACGGAGCCCCAGCACAAGACTACCAAAAGTATGAGGTAGTGCTCCTGGTGGGGCTAGGGATCGGCGC
CACGCCCATGGTGAGCATCGTGAAGGACATCATCAACAACATAAAAGTCAAAGAAAACGAGCAAGACCACATGGGCTCGTTGGAGAGTGGAGGACGACCCGTCTCGCCACTAACCCCGGA
CGACAGCAACAGCCACTATCCCAAGGCGGGCCACAGGAGCAGCCATGGCAGAGGAGCGTTCAAGACCAGGAAGGCCTACTTCTACTGGGTGACCCGGGAGCAGGGCTCGTTCGAGTGGTT
CAAGGGGATCATGGATGAGGTGGCCGGGATGGACGAGCGGCAGGTCATCGAGCTCCACAACTACTGCACGAGCGTGTTCGAGGAGGGCGACGCCCGGTCGGCCCTCATCGCGATGCTCCA
GACCCTCAACCACGCGAAGCACGGGGTCGACGTCGTGTCCGGGACCCGGGTCATGTCCCACTTCGCCAAGCCCAACTGGCGCCAGGTCTACAAGAAGATCGCGCTGCACCACCCCGACAA
GCGAGTTG
GTGGGTCCCCGCTTAACCTAACCCCCGCGCCCGCCGTGTCTTTAGTGATTCTGCTTGATTCGAACGATTTGTCACATCTATTTTTGTTATGCATGCGTTGTTGATTTGGCCA
CGATGAACAATTTTGCAGGAGTCTTCTATTGTGGGGCGCCGGCGTTGACAAAGGAGTTAAATCACTTGGCTCTGGATTTCTCTCGCAAGACATCCACCAAGTTCGACTTCCATAAGGAGA
ACTTTTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGAAACGAAGAGATTGGGATGGGAACTTTTAACTATTCATCGGATAACAACAATAGTTCCGACACGGAAAGCGTCGGGAGCGACGGCCGCACAGCCTTCAGCGGGCCGCTCGGATCG
GCCCTTCGCAGCTCCAAGCGAGGCTCAAGAAAGAGCGCGAGATTCAACATCCCTGCGGAGACGGCGGGGCTCCGGAGTGCCGGCGCCACCTCGAAAGACGAGCAGGAAGATGGCGACCCG
TACGTCGAGATCACCCTCGACATACGGGACGACGGCGTCGCCGTCCACAGCGTGCAGGCCGCCGGCGGGGCGACCAACTTCGAGGACCCCGAGCTGGCGCTGCTCGCGAAGAGGACGTTC
GAGACCCGGAGGTCGTCGTCGTTTGGGTCGTCCGTCTTCCGGAGCACCTCGTCCCGTTTCCGGCAGGTCTCGCAGGAGCTGAAGCGCATCGCCTCCCTGACGCGGCGGCCGACGGCACCA
CCGGCGAGGCGCTTCGACCGGACGAGGTCGGCAGCGGCGCACGCGCTCAAGGGCCTCAAGTTCATAGCCGCCAAGACGGGCGGCGGCGGCGGCGGCGCTGGCTCCGCCGCCTCTGGGTGG
CCGTCGGTCGAGAAGAAATTCGACCAGTTGACCGCTTCGTCCGGCGGCCTCCTGCATTGTTCCCAGTTCTGTGAATGCATAG
GAATGAACAAAGAGTCTAAGGAATTTGCGACCGAGCTC
TTTCGAGCACTCGCGCAGAGGCGCAACATATTTGGCGACTCCATCACCAAGGATCAGCTCAAGGAATTCTGGGAACAAATTAGCGACGAGAGCTTCGACTCGAGGCTGCAAACTTTCTTC
GACAT
GGTGGACAAAGACGCGGATGGGAGAATCGCGGAGGAAGAAGTCAGAGAGATCATCACCCTGAGCGCATCGGCGAATAAGCTGTCAAATATCCAGAAGCAAGCCGACGAATATGCA
GCTCTCATCATGGAGGAATTGGACCCTGATAATAAGGGATACATCATG
GTTCAGAACCTGGAAACACTGCTCTTGCAAGCTCCGAACCAGTCCGTGAGAGTCGGAGACAGCAAAGTCCTG
AGCCAGCTACTGAGCCAGAAGCTCAAACCGACCATCGACAACAACCCAGTCCGCCGATGGTGTGAGCACGCCAAGTACTTCCTGATGGACAACTGGAAGAGGCTGTGGGTCATGGTGCTG
TGGATTGCGATCATGGCGGGCCTCTTCACCTACAAGTTCATCCAGTACCGGAACAGGGCGGCATTCGGCGTGATGGGCTACTGCGTCTGTGTTGCCAAGGGCGGTGCCGAGACAGTCAAG
TTCAACATGGCCCTCATCCTGTTGCCCGTTTGTCGAAACACCATCACATGGCTTAGGAACAAGACCCGGTTGAGTGTTGCGGTCCCCTTCGACGACAACCTTAACTTTCACAAG
GTGATC
GCGGCAGGGATAGCTGTCGGGGTCGGGTTGCATGTAATCTCGCATTTGACGTGCGACTTCCCAAGGCTCCTACTCGCGAGCCCCGAGGCGTACGAGCCCATGAAGCCCTACTTCGGCGAG
AAGCAGCCCCCGAACTACTGGTGGTTCGTGAAAGGAGTGGAGGGCGTGACGGGGATCCTGATGCTGGTTCTGATGGCGATCGCCTTCACGCTGGCCATGCCGTGGTTCAGGAGGAGCAAG
ATCAACGTGCCCGGGCCCTTAAAGAAGCTCACGGGCTTCAACGCCTTCTGGTACTCGCACCACCTCTTCGTCATCGTCTACACGCTGCTCATCGTCCACGGGATCAAGCTCTACCTCGCC
CACGATTGGTACAAGAAGACG
ACATGGATGTACTTGGCAGTGCCGGTGACCCTCTATGCGTGTGAAAGGTTGATCCGGGCTTTCAGGTCCAGCATCAAGCCGGTGAAGATTCTCAAGGTG
GCGGTTTACCCGGGGAATGTACTGGCACTGCACATGTCGAAGCCCCATGGGTTCAAGTACAGAAGTGGGCAATACATGTTCGTAAACTGCTCGGCTGTTTCTCCCTTTGAATG
GCACCCT
TTCTCGATCACTTCGTCCCCGGGAGACGACTACCTCAGCGTCCACATTCGGACATTGGGAGATTGGACAAGGCAACTGAAAAGCGTATTCTCGGAG
GTATGCCAACCTCCATCCGTTGGG
AAAAGTGGACTGCTGAGAGCTGATTGCGTTCCAGGAGGAAGCATCCCACG
CTTCCCAAAGATACTGATAGACGGTCCATACGGAGCCCCAGCACAAGACTACCAAAAGTATGAGGTAGTG
CTCCTGGTGGGGCTAGGGATCGGCGCCACGCCCATGGTGAGCATCGTGAAGGACATCATCAACAACATAAAAGTCAAAGAAAACGAGCAAGACCACATGGGCTCGTTGGAGAGTGGAGGA
CGACCCGTCTCGCCACTAACCCCGGACGACAGCAACAGCCACTATCCCAAGGCGGGCCACAGGAGCAGCCATGGCAGAGGAGCGTTCAAGACCAGGAAGGCCTACTTCTACTGGGTGACC
CGGGAGCAGGGCTCGTTCGAGTGGTTCAAGGGGATCATGGATGAGGTGGCCGGGATGGACGAGCGGCAGGTCATCGAGCTCCACAACTACTGCACGAGCGTGTTCGAGGAGGGCGACGCC
CGGTCGGCCCTCATCGCGATGCTCCAGACCCTCAACCACGCGAAGCACGGGGTCGACGTCGTGTCCGGGACCCGGGTCATGTCCCACTTCGCCAAGCCCAACTGGCGCCAGGTCTACAAG
AAGATCGCGCTGCACCACCCCGACAAGCGAGTTG
GAGTCTTCTATTGTGGGGCGCCGGCGTTGACAAAGGAGTTAAATCACTTGGCTCTGGATTTCTCTCGCAAGACATCCACCAAGTTC
GACTTCCATAAGGAGAACTTTTGA

Retrieve as FASTA