Entry information : Egr1CysPrx[P]02
Entry ID 10185
Creation 2012-01-25 (Qiang Li)
Last sequence changes 2013-03-13 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-02-24 (Christophe Dunand)
Peroxidase information: Egr1CysPrx[P]02
Name Egr1CysPrx[P]02
Class 1-Cysteine peroxiredoxin     [Orthogroup: 1CysPrx001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Egr1CysPrx[P]02
start..stop
S start..stop
Egu1CysPrx[P]02 362 4e-130 1..191 1..191
Ecam1CysPrx[P]02 328 5e-117 1..190 1..189
Egu1CysPrx03 306 1e-107 1..191 32..220
Egr1CysPrx03 306 1e-107 1..191 32..220
Literature and cross-references Egr1CysPrx[P]02
DNA ref. Phytozome 11:   scaffold_7 (37342925..37341774)
Protein sequence: Egr1CysPrx[P]02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   191
PWM (Da):   %s   21300.18  
PI (pH):   %s   9.96
Sequence
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Send to Peroxiscan
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WVMSFSWPLA MRGYTTTELG KMAVYVPELE RKGxVKLLSF SCDEVKSHKA WIKDIEAFTP GAKVTYPIIA NLNRExKIKE LNLVEPEEKD ASGKQVPSRA LHIVGPDKKI KLSFLYPTSM 
GRNMDEVARV LDSLQRAMKH KIATPCNWKP GDAVVISLSI SNEQAKEMSP QGFKTADLLS RKYYLRFTHI D 

Retrieve as FASTA  
Remarks Pseudogene sequence from genomic (5' end is missing) due to NNN in DNA. No prediction from phytozome. No EST. complement(join(37341774..37342022,37342227..37342375,37342750..37342925)).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TGGGTGATGT CATTTTCATG GCCCCTTGCG ATGAGAGGAT ACACCACGAC GGAGCTCGGG AAGATGGCAG TGTACGTGCC GGAGCTCGAG CGGAAGGGGG GnGTGAAGCT CCTGAGCTTT  TCCTGCGACG AGGTCAAGTC GCACAAGGCG TGGATCAAGG ACATAGAGGC CTTCACTGTC CGCTACTCTT CTCTCTCACT CTGCCTATTA GACCTTTTCA TCACTTGGCA TACATATATA  CTGCATGTCC TGTATTAACT TGCCTGTTTT GATATGGATG TTGGGTTTGA TCTGATTTGG GTGATTGTAT TGTTCAAAAA GGAAAAGAAG GAGAACTTAT AGAAATATGT GGTATTATAA  TTTAGTAGAT TGACCAAGGG AAGTCTCCTT ATTAGGCACA ATTTGGGTTA GATTGAGGTG GTTTAATTGC GGGTCACGGG GCTGACTGTT CTGTCTCACA TTTGAGATTG GGGCCTTTGG  CTTTTGTGCA ATTTTCATTA TTCCAATTTC AAGCCAACAC TGTTCTGTCG TGTAATTATG TTGGGGTGCA GCCCGGGGCC AAGGTGACAT ACCCGATAAT CGCCAACCTG AATAGAGAAA  AnAAAATCAA AGAGCTCAAC CTGGTCGAGC CAGAGGAGAA AGACGCTTCA GGGAAGCAAG TCCCTTCTAG AGCTCTGCAC ATCGTCGGTC CTGATAAGAA GGTATACATG CCCTTCTACC  TTTTCCTTCT CCCGTTAATT AAACTTGTAT CAAATGAAAC AAACTGCATA AACCAATGCC ATCTTATGCA TGTCTGTTAT ATGTGTATTA CTTAAAGTAG CATAAACCAT TTATCCCATT  TAAACAGAGC AGATGCAGCA GGACTCTGGA TCATCTATTT TCACAATATA ACATAATTTG TATTGATCAA GCTGAGTTTC CTGTACCCCA CGAGCATGGG AAGGAACATG GACGAGGTGG  CGAGGGTGCT GGACTCCCTG CAGAGGGCGA TGAAGCACAA GATCGCCACC CCATGCAACT GGAAGCCAGG GGACGCGGTC GTCATCTCGC TGTCCATCTC CAACGAGCAG GCCAAGGAGA 
TGTCCCCGCA GGGCTTCAAG ACCGCCGATC TTCTGTCCAG GAAGTATTAC CTCCGCTTCA CTCATATCGA TTAG 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TGGGTGATGT CATTTTCATG GCCCCTTGCG ATGAGAGGAT ACACCACGAC GGAGCTCGGG AAGATGGCAG TGTACGTGCC GGAGCTCGAG CGGAAGGGGG GnGTGAAGCT CCTGAGCTTT  TCCTGCGACG AGGTCAAGTC GCACAAGGCG TGGATCAAGG ACATAGAGGC CTTCACTCCC GGGGCCAAGG TGACATACCC GATAATCGCC AACCTGAATA GAGAAAAnAA AATCAAAGAG  CTCAACCTGG TCGAGCCAGA GGAGAAAGAC GCTTCAGGGA AGCAAGTCCC TTCTAGAGCT CTGCACATCG TCGGTCCTGA TAAGAAGGTA TACATGCCAT CAAGCTGAGT TTCCTGTACC  CCACGAGCAT GGGAAGGAAC ATGGACGAGG TGGCGAGGGT GCTGGACTCC CTGCAGAGGG CGATGAAGCA CAAGATCGCC ACCCCATGCA ACTGGAAGCC AGGGGACGCG GTCGTCATCT 
CGCTGTCCAT CTCCAACGAG CAGGCCAAGG AGATGTCCCC GCAGGGCTTC AAGACCGCCG ATCTTCTGTC CAGGAAGTAT TACCTCCGCT TCACTCATAT CGATTAG 

Retrieve as FASTA