Entry information : BaDyPrx07
Entry ID 10228
Creation 2012-01-31 (Christophe Dunand)
Last sequence changes 2012-01-31 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-03-01 (Catherine Mathe)
Peroxidase information: BaDyPrx07
Name BaDyPrx07
Class DyP-type peroxidase D    [Orthogroup: DyPrxD001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Meruliaceae Bjerkandera
Organism Bjerkandera adusta    [TaxId: 5331 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BaDyPrx07
start..stop
S start..stop
PplDyPrx01 677 0 1..643 1..685
PplDyPrx02 597 0 1..651 1..639
PgigDyPrx04 498 3e-171 13..498 9..525
GluxDyPrx02 447 5e-151 17..496 19..568
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 736980..737141 162 N° 2 737193..737538 346 N° 3 737597..737750 154 N° 4 737808..738102 295
N° 5 738158..738391 234 N° 6 738446..738611 166 N° 7 738665..738960 296 N° 8 739016..739191 176
N° 9 739252..739339 88 N° 10 739395..739436 42  
join(736980..737141,737193..737538,737597..737750,737808..738102,738158..738391, 738446..738611,738665..738960,739016..739191,739252..739339,739395..739436)


exon

Literature and cross-references BaDyPrx07
DNA ref. JGI genome:   scaffold_10 (736980..739436)
Cluster/Prediction ref. JGI gene:   169535
Protein sequence: BaDyPrx07
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   653
PWM (Da):   %s   72109.46  
PI (pH):   %s   7.47
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MEHPELDHTHLKHFSNRSILPLLKSDPQYKQLKVDGPLPDTNNVQGDIYVLFPKDFENFLFFSISNVAQFKKDLAAYNPTTTHDVLGKLHKISGAKASRGDRVEMYNSQIAFSRIGLDLLGHTEKVRDDHFDQGSMKNEFASKVLGDSGPWYEPFASQTIHGVFTIAVSHDSTCKQGTAEITAKFSDSVIITKVEGKARPGAERGHEHFGYMDGVSQPALRGLIKPRKGQLQADAGVVIMGYKGDPYLNQRPAWTKDGTLMVFRKLEQDVVGFDEYLAKAGPLWRKFLPPSQVPKVNPPLSDKEGAELFGARMVGRWKSGAPLANAPFRENPSLATDADKANDFDYSIPGVYGPTDLVCPFSCHTRKTAPRNLDPYLQQQLIETALVVRAGLPYGNEVTPAERDPNGRNLTPDRGLLFVCYQSSIEKGFWQQTKAFAGNDFFPPTGLVPQRSGQDPIIGSPEDVPSTQVVKPEFFVTSRGGEYFFVPSVATLRDWAGGLPPLITGPPTVSGKYRIKTIGQSPNSYWKLTFRTPEDPWISLAPLSAHDRAQEWNITVLSPGRYNITSVLDGSGLVKSTYGYWGYGFPVRSEGTGTVWAMQAQTIGGDTFTKISLGSGGSSYVLDSENEDRTVVHFYSKKNDALNQRWVFETVQ*

Retrieve as FASTA  
Remarks Complete sequence from genomic (9 introns). Missing seq and extra seq => prob of prediction?
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGCACCCAGAGCTCGATCACACTCACCTCAAGCACTTCAGCAATCGGTCCATCCTCCCGCTCCTCAAGTCCGACCCGCAGTATAAGCAACTCAAAGTCGACGGCCCACTCCCTGAC
ACCAACAACGTCCAGGGCGACATCTACGTGCTATTCCCGAAG
GTCTGTGCGCGTCACTGCACGCCTTCATTCACGCATTGACGCCACACACAGGACTTCGAGAATTTCCTGTTCTTCAGC
ATCAGCAATGTCGCACAGTTCAAGAAGGACCTAGCAGCGTACAATCCAACTACGACGCACGACGTGCTCGGCAAACTGCACAAGATATCCGGGGCCAAGGCATCGAGAGGGGATCGCGTC
GAGATGTACAACTCCCAGATCGCCTTCTCCCGCATTGGGCTGGACCTCCTTGGACACACCGAGAAGGTCCGCGACGACCACTTTGACCAAGGATCCATGAAGAACGAGTTCGCGTCGAAG
GTTCTCGGCGATAGCGGCCCGTGGTACGAGCCGTTTGCGTCGCAGACCATACACGGTGTCTTCACCATCGCTGTGAGTC
GTGAGTATCGGGCCTTTCGTCCGTACTCATGATGCAAGGGG
TCTGACATCTATTGTAGACGACTCGACGTGTAAGCAGGGCACTGCCGAGATCACAGCGAAGTTCAGTGACTCTGTTATCATTACAAAGGTAGAAGGCAAAGCGCGTCCTGGGGCAGAGCG
AGGGCACGAGCACTTCGGCTACATGGATGGAGTTTCTCAACCTGCATTACG
GTGAACAAACAAACAATTCACCCACCAGAATACGAGACTGATACCAGGGCATTCTAGGGGCCTGATCAA
GCCGCGCAAAGGGCAACTCCAGGCAGATGCAGGCGTCGTCATTATGGGCTACAAAGGCGACCCGTACTTAAACCAGCGCCCTGCTTGGACCAAGGACGGAACACTAATGGTATTCCGTAA
GCTCGAGCAAGACGTCGTTGGGTTCGACGAGTACCTCGCGAAAGCAGGTCCTCTGTGGCGCAAGTTCCTGCCTCCATCGCAGGTGCCCAAGGTAAATCCACCTCTATCGGATAAGGAAGG
CGCAGAGCTTTTCGGCGCAAGGATGGTGGGAAGGTGGAAATCG
GTACGGGAATTCTTTCGACTCGGCGTCGCTCTGGGTTGACCTGGCCGTGGCGTAGGGCGCCCCTCTTGCGAATGCTC
CGTTCCGCGAGAACCCTTCGCTCGCGACGGACGCAGACAAGGCAAATGACTTCGACTATAGCATCCCCGGCGTATACGGCCCCACCGATTTGGTCTGCCCCTTCAGTTGCCACACGCGCA
AAACCGCGCCTAGGAACTTAGATCCGTATCTCCAACAGCAGTTGATTGAGACGGCGTTAGTCGTCCGCGCTGGTCTGCCGTACGGTAACGAG
GTGGGTGATATGTTTCAGCAATTCTTGA
GGTTGGTCTGAAGGCTGTACTTGCAGGTGACTCCAGCCGAGCGGGACCCCAATGGCAGGAACCTCACACCCGATCGCGGCTTGCTCTTTGTGTGCTACCAATCATCTATCGAGAAAGGGT
TCTGGCAGCAAACGAAGGCTTTCGCGGGGAACGACTTCTTTCCTCCGACAGGTCTCGTACCTCAACGATCAG
GTAAGCCTATCATCTTCTAATGTGCCAGGTACCAGAGACTCACCCGTG
TCAAGGTCAAGACCCCATCATCGGAAGCCCGGAAGACGTCCCTTCTACACAAGTTGTAAAACCCGAGTTCTTCGTCACGTCTCGCGGTGGCGAGTATTTCTTCGTTCCGTCAGTGGCTAC
GTTGCGCGACTGGGCCGGCGGCTTGCCGCCTCTCATCACTGGCCCGCCGACGGTGTCGGGGAAGTACAGGATCAAGACCATCGGACAGTCCCCAAACTCGTACTGGAAGTTGACATTCCG
GACACCTGAGGATCCGTGGATCAGCCTTGCGCCCTTGAGTGCCCACGATAGAGCACAGGAG
GTACGTTTGTCGTTGCTCTCTTGTGGATAACGCGTCGTGACGGATCTTCTGCTAGTGGA
ATATCACTGTCCTGTCTCCTGGGCGGTACAATATCACTAGCGTGCTCGATGGGTCCGGGCTCGTGAAGTCGACGTATGGCTACTGGGGCTACGGCTTCCCCGTCCGCTCCGAGGGGACCG
GAACAGTTTGGGCCATGCAGGCCCAGACGATCGGCGGGGACACGTTCACGAA
GTACGTCTTCATGCTTTTCTACAGGCGTACACCGTGCTGAGGTTCGGCTTTTGTCCAAAGGATCAGCC
TGGGTAGCGGAGGATCGAGTTACGTACTCGACAGCGAGAACGAGGACAGAACGGTTGTTCACTTCTACTCGAAGAAAAAT
GTGAGTAATCTCGGAAAGACAAGTAGAGACATTTTTATTC
ACATCGGTACCGTAGGATGCTCTCAATCAACGCTGGGTCTTCGAGACAGTCCAGTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGCACCCAGAGCTCGATCACACTCACCTCAAGCACTTCAGCAATCGGTCCATCCTCCCGCTCCTCAAGTCCGACCCGCAGTATAAGCAACTCAAAGTCGACGGCCCACTCCCTGAC
ACCAACAACGTCCAGGGCGACATCTACGTGCTATTCCCGAAG
GACTTCGAGAATTTCCTGTTCTTCAGCATCAGCAATGTCGCACAGTTCAAGAAGGACCTAGCAGCGTACAATCCAACT
ACGACGCACGACGTGCTCGGCAAACTGCACAAGATATCCGGGGCCAAGGCATCGAGAGGGGATCGCGTCGAGATGTACAACTCCCAGATCGCCTTCTCCCGCATTGGGCTGGACCTCCTT
GGACACACCGAGAAGGTCCGCGACGACCACTTTGACCAAGGATCCATGAAGAACGAGTTCGCGTCGAAGGTTCTCGGCGATAGCGGCCCGTGGTACGAGCCGTTTGCGTCGCAGACCATA
CACGGTGTCTTCACCATCGCTGTGAGTC
ACGACTCGACGTGTAAGCAGGGCACTGCCGAGATCACAGCGAAGTTCAGTGACTCTGTTATCATTACAAAGGTAGAAGGCAAAGCGCGTCCT
GGGGCAGAGCGAGGGCACGAGCACTTCGGCTACATGGATGGAGTTTCTCAACCTGCATTACG
GGGCCTGATCAAGCCGCGCAAAGGGCAACTCCAGGCAGATGCAGGCGTCGTCATTATG
GGCTACAAAGGCGACCCGTACTTAAACCAGCGCCCTGCTTGGACCAAGGACGGAACACTAATGGTATTCCGTAAGCTCGAGCAAGACGTCGTTGGGTTCGACGAGTACCTCGCGAAAGCA
GGTCCTCTGTGGCGCAAGTTCCTGCCTCCATCGCAGGTGCCCAAGGTAAATCCACCTCTATCGGATAAGGAAGGCGCAGAGCTTTTCGGCGCAAGGATGGTGGGAAGGTGGAAATCG
GGC
GCCCCTCTTGCGAATGCTCCGTTCCGCGAGAACCCTTCGCTCGCGACGGACGCAGACAAGGCAAATGACTTCGACTATAGCATCCCCGGCGTATACGGCCCCACCGATTTGGTCTGCCCC
TTCAGTTGCCACACGCGCAAAACCGCGCCTAGGAACTTAGATCCGTATCTCCAACAGCAGTTGATTGAGACGGCGTTAGTCGTCCGCGCTGGTCTGCCGTACGGTAACGAG
GTGACTCCA
GCCGAGCGGGACCCCAATGGCAGGAACCTCACACCCGATCGCGGCTTGCTCTTTGTGTGCTACCAATCATCTATCGAGAAAGGGTTCTGGCAGCAAACGAAGGCTTTCGCGGGGAACGAC
TTCTTTCCTCCGACAGGTCTCGTACCTCAACGATCAG
GTCAAGACCCCATCATCGGAAGCCCGGAAGACGTCCCTTCTACACAAGTTGTAAAACCCGAGTTCTTCGTCACGTCTCGCGGT
GGCGAGTATTTCTTCGTTCCGTCAGTGGCTACGTTGCGCGACTGGGCCGGCGGCTTGCCGCCTCTCATCACTGGCCCGCCGACGGTGTCGGGGAAGTACAGGATCAAGACCATCGGACAG
TCCCCAAACTCGTACTGGAAGTTGACATTCCGGACACCTGAGGATCCGTGGATCAGCCTTGCGCCCTTGAGTGCCCACGATAGAGCACAGGAG
TGGAATATCACTGTCCTGTCTCCTGGG
CGGTACAATATCACTAGCGTGCTCGATGGGTCCGGGCTCGTGAAGTCGACGTATGGCTACTGGGGCTACGGCTTCCCCGTCCGCTCCGAGGGGACCGGAACAGTTTGGGCCATGCAGGCC
CAGACGATCGGCGGGGACACGTTCACGAA
GATCAGCCTGGGTAGCGGAGGATCGAGTTACGTACTCGACAGCGAGAACGAGGACAGAACGGTTGTTCACTTCTACTCGAAGAAAAATGAT
GCTCTCAATCAACGCTGGGTCTTCGAGACAGTCCAGTAA

Retrieve as FASTA