Entry information : EcamAPx06 (EcS615558.10)
Entry ID 10243
Creation 2012-01-30 (Qiang Li)
Last sequence changes 2012-02-02 (Qiang Li)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2013-02-06 (Qiang Li)
Peroxidase information: EcamAPx06 (EcS615558.10)
Name (synonym) EcamAPx06 (EcS615558.10)
Class Ascorbate peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamAPx06
start..stop
S start..stop
EgrAPx[P]02 127 3e-41 1..61 18..78
EcamAPx[P]05 127 3e-41 1..61 18..78
EglAPx[P]05 127 3e-41 1..61 11..71
EguAPx[P]05 129 4e-41 1..61 18..78
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..80 80 N° 2 170..272 103  
join(1..80,170..272)


exon

Literature and cross-references EcamAPx06 (EcS615558.10)
Protein sequence: EcamAPx06 (EcS615558.10)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   61
PWM (Da):   %s   6849.49  
PI (pH):   %s   4.67
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GRAHQERSGFDGPWTQEPLKFDNSYFVELLKGEAEGLLKLPTDKALLENPAFRPYVELYA

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from kazusa (Two ends are missing due to short contig).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGAAGGGCACACCAGGAAAGATCTGGATTTGATGGTCCTTGGACTCAGGAACCCCTTAAGTTTGATAATTCCTATTTTGTGTAAGATTTCATCTTTTCACTGGATGCATTTTCTAAGTTT
CGGCTGGAGCATTATAGAGCCAGATACTAATTGATCATTTTTGACACAGCGAGTTGTTGAAAGGGGAAGCAGAGGGGCTGCTGAAACTGCCAACTGACAAGGCATTGCTGGAAAATCCTG
CATTTCGCCCTTATGTGGAGTTGTATGCGAAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGAAGGGCACACCAGGAAAGATCTGGATTTGATGGTCCTTGGACTCAGGAACCCCTTAAGTTTGATAATTCCTATTTTGTCGAGTTGTTGAAAGGGGAAGCAGAGGGGCTGCTGAAACTG
CCAACTGACAAGGCATTGCTGGAAAATCCTGCATTTCGCCCTTATGTGGAGTTGTATGCGAAG

Retrieve as FASTA