Entry information : EcamPrx52 (EcC002968.10)
Entry ID 10261
Creation 2012-01-30 (Qiang Li)
Last sequence changes 2012-02-02 (Qiang Li)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2013-02-06 (Qiang Li)
Peroxidase information: EcamPrx52 (EcC002968.10)
Name (synonym) EcamPrx52 (EcC002968.10)
Class Class III peroxidase     [Orthogroup: Prx047]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamPrx52
start..stop
S start..stop
EgrPrx52 285 2e-98 10..149 194..333
EgrPrx50 285 2e-98 10..149 194..333
EglPrx52 285 2e-98 10..149 194..333
EcamPrx50 282 2e-97 10..149 194..333
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..447 447  
join(1..447)


exon

Literature and cross-references EcamPrx52 (EcC002968.10)
Protein sequence: EcamPrx52 (EcC002968.10)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   149
PWM (Da):   %s   16364.86  
PI (pH):   %s   6.49
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
LTFPAYDNKT GAHTFGRAQC KSFNPRLYNF TANGGPDPTI NPWYLTNLRK LCPQNGDSSV LADLDPTTPN SFDNHYYSNL QKNEGLLLSD QELYSTAGAA TISIVNSFSF DQSAFFESFA 
RSIVNMGNIS PLTGSNGEIR CNCRKVNWS 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from kazusa (Big 5' end is missing).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CTAACTTTTC CTGCATACGA CAATAAAACA GGAGCTCACA CCTTCGGACG TGCACAGTGC AAGTCATTCA ACCCTAGGCT CTACAACTTC ACCGCGAACG GTGGCCCTGA TCCCACCATA  AACCCGTGGT ACTTGACCAA TCTCCGGAAA CTTTGCCCTC AGAATGGCGA CAGTAGTGTC CTCGCCGACC TCGACCCGAC AACCCCAAAC TCGTTTGACA ACCACTACTA CTCCAACCTC  CAGAAAAATG AAGGGCTTCT TCTGTCCGAT CAAGAGCTGT ACTCCACAGC TGGCGCCGCA ACAATTTCCA TCGTCAACAG CTTTAGCTTT GACCAGAGTG CCTTCTTCGA GAGCTTCGCT 
CGGTCGATAG TAAACATGGG AAATATTAGT CCTCTCACCG GAAGTAACGG GGAGATCCGG TGCAATTGTA GGAAGGTCAA CTGGAGT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CTAACTTTTC CTGCATACGA CAATAAAACA GGAGCTCACA CCTTCGGACG TGCACAGTGC AAGTCATTCA ACCCTAGGCT CTACAACTTC ACCGCGAACG GTGGCCCTGA TCCCACCATA  AACCCGTGGT ACTTGACCAA TCTCCGGAAA CTTTGCCCTC AGAATGGCGA CAGTAGTGTC CTCGCCGACC TCGACCCGAC AACCCCAAAC TCGTTTGACA ACCACTACTA CTCCAACCTC  CAGAAAAATG AAGGGCTTCT TCTGTCCGAT CAAGAGCTGT ACTCCACAGC TGGCGCCGCA ACAATTTCCA TCGTCAACAG CTTTAGCTTT GACCAGAGTG CCTTCTTCGA GAGCTTCGCT 
CGGTCGATAG TAAACATGGG AAATATTAGT CCTCTCACCG GAAGTAACGG GGAGATCCGG TGCAATTGTA GGAAGGTCAA CTGGAGT 

Retrieve as FASTA