Entry information : EcamPrx154 (EcC045991.20)
Entry ID 10280
Creation 2012-01-30 (Qiang Li)
Last sequence changes 2012-02-03 (Qiang Li)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2013-02-06 (Qiang Li)
Peroxidase information: EcamPrx154 (EcC045991.20)
Name (synonym) EcamPrx154 (EcC045991.20)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamPrx154
start..stop
S start..stop
EcamPrx153 179 2e-60 1..89 46..134
EgrPrx151 182 3e-59 1..89 227..315
EglPrx151 181 6e-59 1..89 227..315
EgrPrx153 180 2e-58 1..89 227..315
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..270 270  
join(1..270)


exon

Literature and cross-references EcamPrx154 (EcC045991.20)
Protein sequence: EcamPrx154 (EcC045991.20)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   89
PWM (Da):   %s   9499.81  
PI (pH):   %s   9.79
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ASDPTVPLDL VTPNRLDNKY YTNLKNHRGL LTSDQTLSNS PSTANIVRSN ANNGGAWANK FAAAMVKMGS IDVLTGNEGE IRRKCMVVN 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from kazusa (3' end is missing due to the ending of contig).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GCTAGCGATC CCACTGTGCC ATTGGACTTG GTCACGCCGA ACAGGCTAGA CAACAAGTAC TACACTAATT TGAAGAACCA CCGAGGCCTA TTGACTTCTG ATCAGACTCT TTCTAACAGC  CCTTCGACAG CGAATATTGT GAGGAGCAAT GCAAATAATG GCGGAGCATG GGCTAACAAG TTCGCGGCGG CAATGGTGAA GATGGGATCG ATTGACGTCC TAACCGGGAA CGAGGGTGAG 
ATTAGGAGGA AATGCATGGT GGTAAACTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GCTAGCGATC CCACTGTGCC ATTGGACTTG GTCACGCCGA ACAGGCTAGA CAACAAGTAC TACACTAATT TGAAGAACCA CCGAGGCCTA TTGACTTCTG ATCAGACTCT TTCTAACAGC  CCTTCGACAG CGAATATTGT GAGGAGCAAT GCAAATAATG GCGGAGCATG GGCTAACAAG TTCGCGGCGG CAATGGTGAA GATGGGATCG ATTGACGTCC TAACCGGGAA CGAGGGTGAG 
ATTAGGAGGA AATGCATGGT GGTAAACTAG 

Retrieve as FASTA