Entry information : EcamPrx13 (EcC050829.50)
Entry ID 10293
Creation 2012-01-30 (Qiang Li)
Last sequence changes 2013-02-06 (Qiang Li)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-03-14 (Qiang Li)
Peroxidase information: EcamPrx13 (EcC050829.50)
Name (synonym) EcamPrx13 (EcC050829.50)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamPrx13
start..stop
S start..stop
EgrPrx13 176 6e-57 1..83 252..334
EglPrx04 174 7e-57 1..82 170..251
EguPrx04 176 7e-57 1..83 252..334
EgrPrx04 176 9e-57 1..83 252..334
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1371..1619 249  
join(1371..1619)


exon

Literature and cross-references EcamPrx13 (EcC050829.50)
Protein sequence: EcamPrx13 (EcC050829.50)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   83
PWM (Da):   %s   9510.79  
PI (pH):   %s   9.16
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

DSGSSNRFGK TFYSRVLNHR AVLSIDQQIA DREESLQIAR RYDANFEDFL KMFGYAMTKL GNTWLLPGDQ GEIRKNCRVV NRK 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from kazusa (5' end is missing due to the ending of contig).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GACTCAGGCT CGAGTAACAG GTTCGGCAAA ACCTTCTACT CCAGGGTCCT GAACCACCGG GCCGTCCTCA GCATCGACCA GCAGATCGCC GACCGTGAGG AGAGCCTCCA GATTGCCCGG  CGGTACGATG CCAATTTTGA GGACTTCCTG AAGATGTTCG GCTATGCTAT GACCAAGCTG GGGAACACCT GGCTCCTGCC AGGGGATCAG GGTGAGATTC GCAAGAATTG CCGAGTCGTG 
AACAGGAAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GACTCAGGCT CGAGTAACAG GTTCGGCAAA ACCTTCTACT CCAGGGTCCT GAACCACCGG GCCGTCCTCA GCATCGACCA GCAGATCGCC GACCGTGAGG AGAGCCTCCA GATTGCCCGG  CGGTACGATG CCAATTTTGA GGACTTCCTG AAGATGTTCG GCTATGCTAT GACCAAGCTG GGGAACACCT GGCTCCTGCC AGGGGATCAG GGTGAGATTC GCAAGAATTG CCGAGTCGTG 
AACAGGAAA 

Retrieve as FASTA