Entry information : EcamPrx103 (EcC055166.200)
Entry ID 10329
Creation 2012-01-30 (Qiang Li)
Last sequence changes 2012-02-03 (Qiang Li)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2013-02-06 (Qiang Li)
Peroxidase information: EcamPrx103 (EcC055166.200)
Name (synonym) EcamPrx103 (EcC055166.200)
Class Class III peroxidase     [Orthogroup: Prx021]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamPrx103
start..stop
S start..stop
EgrPrx110 531 0 1..260 80..339
EglPrx110 529 0 1..260 80..339
EguPrx110 520 0 1..260 80..339
EcamPrx109 436 4e-156 1..259 80..338
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..192 192 N° 2 338..503 166 N° 3 658..1079 422  
join(1..192,338..503,658..1079)


exon

Literature and cross-references EcamPrx103 (EcC055166.200)
Protein sequence: EcamPrx103 (EcC055166.200)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   260
PWM (Da):   %s   27683.61  
PI (pH):   %s   4.47
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GCDGSVLLDDTVTLQGEKTASPNINSLDGFDIIDKIKNKVESDCPGIVSCADILTIAARDAVILVGGPYWDVPVGRKDSRTASSELANTNIPTANEGLTSIISKFLSLGLSVTDTVALSGAHTIGMARCENYRARIYGDYESTSGGSPSSEARLSKLKSTCPAAGGGEDNIAPMDYETPNVFDNSYYHLLLNGEGLLNSDQELYSSVLAIQTKKIAVQYAHDTAAFFQQFSESMVKMGNITNSDSFVNGEVRKNCRFIN

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from kazusa (5' end is missing due to the NNNNNN). No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGATGTGACGGTTCGGTTCTGTTAGACGATACAGTCACGCTGCAAGGAGAGAAGACAGCGTCCCCAAATATAAACTCTCTAGATGGTTTTGATATCATCGATAAGATCAAGAACAAAGTT
GAATCCGACTGCCCTGGAATTGTCTCGTGCGCTGATATATTGACAATTGCTGCTAGAGATGCGGTCATTCTG
GTATACATCGTCTTATTTCTCTGAATTCCTCATTTACTTGTCAAACAA
TGTTTTGAATTATAATCTGTGTTGCTGTACTTCTTAACCAAGGAGAAATATCAGCAAATCAACGTGATTAATATCGATCCTCTTTCGTACTTTATAGGTGGGCGGACCGTATTGGGATGT
TCCGGTGGGGAGGAAGGACTCGAGAACTGCAAGCTCCGAGCTCGCAAACACCAACATTCCAACTGCGAACGAAGGTCTCACTTCCATCATTTCCAAGTTCCTTTCCCTCGGCCTCTCTGT
CACCGACACCGTCGCGCTTTCCG
GTAATTATTTTGTTCCTATTCCTCTTTTGTGATTGATCAGATTACTTTCTCAAGTTGAGCTTACTGCCACAGATTCTAAAGCGCAATGATCAAGGCG
GGTATGCTGTCAATTACGTTAAATTTTCCTTAATTATGTGCACATTCCAATCACTAGGGGCTCACACGATCGGCATGGCACGATGTGAGAACTACCGTGCGAGGATATACGGCGACTACG
AATCAACGTCGGGCGGTAGTCCATCCTCCGAAGCACGCCTCAGCAAATTGAAGTCCACATGCCCAGCCGCAGGAGGGGGAGAGGACAACATCGCGCCGATGGACTACGAAACACCCAATG
TATTCGACAACTCCTACTACCATTTGCTCCTGAATGGAGAGGGATTACTCAACTCCGACCAAGAACTGTATTCGAGTGTATTGGCGATTCAGACCAAGAAGATTGCGGTACAGTATGCGC
ATGACACGGCGGCTTTCTTCCAGCAGTTCTCCGAATCCATGGTCAAGATGGGGAACATCACGAATTCGGATAGCTTTGTCAATGGAGAAGTGAGGAAGAACTGCAGATTTATCAATACA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGATGTGACGGTTCGGTTCTGTTAGACGATACAGTCACGCTGCAAGGAGAGAAGACAGCGTCCCCAAATATAAACTCTCTAGATGGTTTTGATATCATCGATAAGATCAAGAACAAAGTT
GAATCCGACTGCCCTGGAATTGTCTCGTGCGCTGATATATTGACAATTGCTGCTAGAGATGCGGTCATTCTG
GTGGGCGGACCGTATTGGGATGTTCCGGTGGGGAGGAAGGACTCGAGA
ACTGCAAGCTCCGAGCTCGCAAACACCAACATTCCAACTGCGAACGAAGGTCTCACTTCCATCATTTCCAAGTTCCTTTCCCTCGGCCTCTCTGTCACCGACACCGTCGCGCTTTCCG
GG
GCTCACACGATCGGCATGGCACGATGTGAGAACTACCGTGCGAGGATATACGGCGACTACGAATCAACGTCGGGCGGTAGTCCATCCTCCGAAGCACGCCTCAGCAAATTGAAGTCCACA
TGCCCAGCCGCAGGAGGGGGAGAGGACAACATCGCGCCGATGGACTACGAAACACCCAATGTATTCGACAACTCCTACTACCATTTGCTCCTGAATGGAGAGGGATTACTCAACTCCGAC
CAAGAACTGTATTCGAGTGTATTGGCGATTCAGACCAAGAAGATTGCGGTACAGTATGCGCATGACACGGCGGCTTTCTTCCAGCAGTTCTCCGAATCCATGGTCAAGATGGGGAACATC
ACGAATTCGGATAGCTTTGTCAATGGAGAAGTGAGGAAGAACTGCAGATTTATCAATACA

Retrieve as FASTA