Entry information : EcamPrx[P]190 ( EcS723577.10)
Entry ID 10367
Creation 2012-01-30 (Qiang Li)
Last sequence changes 2013-02-06 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-13 (Christophe Dunand)
Peroxidase information: EcamPrx[P]190 ( EcS723577.10)
Name (synonym) EcamPrx[P]190 ( EcS723577.10)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamPrx[P]190
start..stop
S start..stop
EgrPrx[P]190 117 4e-37 1..59 32..90
EguPrx[P]190 113 4e-35 1..59 32..90
EglPrx[P]190 112 8e-35 1..59 32..90
PtPrx31 72 3e-17 1..59 14..76
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2..178 177  
join(2..178)


exon

Literature and cross-references EcamPrx[P]190 ( EcS723577.10)
Protein sequence: EcamPrx[P]190 ( EcS723577.10)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   59
PWM (Da):   %s   6384.21  
PI (pH):   %s   5.48
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

LILYPATDAP DAAGLSYDQT CPNDEKLIHG VACWKILKAP NTPAGVLRIF FHDCFVWAC 

Retrieve as FASTA  
Remarks Pseudogene sequence from genomic. Incorrect prediction from kazusa (Two ends are missing due to short contig). Close to EcC071864.10 (removed).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTGATCCTGT ATCCCGCCAC GGATGCACCT GATGCAGCGG GCCTCAGCTA CGATCAGACT TGCCCGAATG ATGAGAAGTT AATCCACGGC GTGGCGTGTT GGAAGATTCT CAAAGCTCCG 
AACACACCCG CTGGCGTTCT TCGCATCTTC TTCCACGACT GCTTTGTCTG GGCGTGT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTGATCCTGT ATCCCGCCAC GGATGCACCT GATGCAGCGG GCCTCAGCTA CGATCAGACT TGCCCGAATG ATGAGAAGTT AATCCACGGC GTGGCGTGTT GGAAGATTCT CAAAGCTCCG 
AACACACCCG CTGGCGTTCT TCGCATCTTC TTCCACGACT GCTTTGTCTG GGCGTGT 

Retrieve as FASTA