Entry information : EcamPrx[P]108 ( EcC017553.10)
Entry ID 10397
Creation 2012-01-30 (Qiang Li)
Last sequence changes 2012-02-06 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-01-22 (Christophe Dunand)
Peroxidase information: EcamPrx[P]108 ( EcC017553.10)
Name (synonym) EcamPrx[P]108 ( EcC017553.10)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamPrx[P]108
start..stop
S start..stop
EguPrx[P]107 261 1e-91 1..127 43..169
EgrPrx[P]107 261 1e-91 1..127 43..169
EglPrx[P]107 259 7e-91 1..127 43..169
EgrPrx[P]111 236 6e-82 1..126 38..163
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..381 381  
join(1..381)


exon

Literature and cross-references EcamPrx[P]108 ( EcC017553.10)
Protein sequence: EcamPrx[P]108 ( EcC017553.10)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   127 (108)
PWM (Da):   %s   14246.27 (12040.0)  
PI (pH):   %s   7.51 (6.93) Peptide Signal:   %s   cut: 20 range:20-127
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
NSLNKWIVIF VLFVSFLVSL RNRKGSSADQ HGRPFALYFS LDSLSPVLLQ RNDDGVIDRE DPALGLQDDF YRHTCPATKE IVRSSMSRVY SQRPEVAPAL LRLLFHDCFI RGCDASVLMD 
GSHGNRS 

Retrieve as FASTA  
Remarks Pseudogene sequence from genomic. Incorrect prediction from kazusa (Both 5' and 3' ends are missing).
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AACTCCCTGA ACAAGTGGAT CGTCATCTTC GTTCTCTTCG TCTCCTTCCT CGTCTCGCTC AGGAATCGCA AGGGCTCAAG TGCAGATCAG CATGGACGGC CCTTCGCCCT CTATTTTTCT  TTGGATTCCC TCTCGCCCGT CCTGCTTCAG AGGAACGATG ATGGGGTCAT CGACCGAGAA GACCCCGCGC TCGGGCTCCA GGACGACTTC TACCGCCACA CGTGCCCTGC TACTAAAGAA  ATCGTGAGGT CATCCATGTC CAGAGTCTAC TCCCAACGCC CCGAAGTTGC CCCCGCGCTT CTCCGTCTCC TCTTCCACGA TTGCTTCATC AGGGGTTGCG ATGCTTCAGT TCTCATGGAC 
GGTAGCCATG GAAACCGAAG C 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AACTCCCTGA ACAAGTGGAT CGTCATCTTC GTTCTCTTCG TCTCCTTCCT CGTCTCGCTC AGGAATCGCA AGGGCTCAAG TGCAGATCAG CATGGACGGC CCTTCGCCCT CTATTTTTCT  TTGGATTCCC TCTCGCCCGT CCTGCTTCAG AGGAACGATG ATGGGGTCAT CGACCGAGAA GACCCCGCGC TCGGGCTCCA GGACGACTTC TACCGCCACA CGTGCCCTGC TACTAAAGAA  ATCGTGAGGT CATCCATGTC CAGAGTCTAC TCCCAACGCC CCGAAGTTGC CCCCGCGCTT CTCCGTCTCC TCTTCCACGA TTGCTTCATC AGGGGTTGCG ATGCTTCAGT TCTCATGGAC 
GGTAGCCATG GAAACCGAAG C 

Retrieve as FASTA