Entry information : EcamPrx[P]49 (EcC034880.30)
Entry ID 10430
Creation 2012-01-30 (Qiang Li)
Last sequence changes 2013-02-07 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2012-03-14 (Qiang Li)
Peroxidase information: EcamPrx[P]49 (EcC034880.30)
Name (synonym) EcamPrx[P]49 (EcC034880.30)
Class Class III peroxidase     [Orthogroup: Prx025]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamPrx[P]49
start..stop
S start..stop
EgrPrx[P]49 269 2e-93 1..143 109..252
EguPrx[P]49 257 9e-89 1..143 109..252
EglPrx[P]49 187 3e-61 1..143 96..238
EcamPrx48 185 2e-59 1..143 175..322
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..428 428  
join(1..428)


exon

Literature and cross-references EcamPrx[P]49 (EcC034880.30)
Protein sequence: EcamPrx[P]49 (EcC034880.30)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   141
PWM (Da):   %s   15069.5  
PI (pH):   %s   8.51
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
FTFTVMGALL DAHSVGAAHC SLFQDRLSNF QGTGALDPTM D*SLVTKLKG ICRNSTSNEP TAFLYQSTSF MADNSSAxQI MQKKGVLRID *ELAIPAPAS FLGSCQMRDE SFACAVVRLG 
NIQVPTGNAK EIRRNCRIFN KPK 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Incorrect prediction from kazusa (Stops in frame; 5' end is missing due to DNA ending). Close to EcC050920.10 (Pseudogene from genomic. Incorrect prediction from kazusa (Stops in frame; 5' end is missing; PS is missing). Removed).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTTACGTTCA CCGTAATGGG GGCTCTTTTG GACGCCCACT CCGTTGGAGC CGCTCACTGC AGCTTGTTCC AGGACCGCCT TTCGAATTTC CAAGGCACTG GAGCTCTGGA TCCAACGATG  GACTAGAGCT TGGTCACGAA GCTGAAGGGC ATTTGCAGGA ACTCGACGAG CAACGAGCCT ACCGCGTTTT TGTACCAGAG CACGTCGTTC ATGGCGGATA ACTCGTCTGC AAAnCAAATT  ATGCAAAAGA AAGGGGTGTT ACGAATCGAC TAGGAGCTCG CAATTCCTGC GCCAGCATCG TTTCTCGGTT CATGTCAGAT GCGAGATGAG AGCTTTGCCT GTGCGGTGGT GAGGCTCGGA 
AATATTCAAG TTCCCACTGG GAATGCTAAA GAAATCAGGA GGAACTGCAG GATTTTCAAT AAGCCCAAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTTACGTTCA CCGTAATGGG GGCTCTTTTG GACGCCCACT CCGTTGGAGC CGCTCACTGC AGCTTGTTCC AGGACCGCCT TTCGAATTTC CAAGGCACTG GAGCTCTGGA TCCAACGATG  GACTAGAGCT TGGTCACGAA GCTGAAGGGC ATTTGCAGGA ACTCGACGAG CAACGAGCCT ACCGCGTTTT TGTACCAGAG CACGTCGTTC ATGGCGGATA ACTCGTCTGC AAAnCAAATT  ATGCAAAAGA AAGGGGTGTT ACGAATCGAC TAGGAGCTCG CAATTCCTGC GCCAGCATCG TTTCTCGGTT CATGTCAGAT GCGAGATGAG AGCTTTGCCT GTGCGGTGGT GAGGCTCGGA 
AATATTCAAG TTCCCACTGG GAATGCTAAA GAAATCAGGA GGAACTGCAG GATTTTCAAT AAGCCCAAG 

Retrieve as FASTA