Entry information : EcamPrx[P]171 ( EcC052562.10)
Entry ID 10434
Creation 2012-01-30 (Qiang Li)
Last sequence changes 2013-02-06 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-11 (Christophe Dunand)
Peroxidase information: EcamPrx[P]171 ( EcC052562.10)
Name (synonym) EcamPrx[P]171 ( EcC052562.10)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamPrx[P]171
start..stop
S start..stop
EguPrx[P]171 213 2e-72 50..180 13..143
EgrPrx[P]171 212 7e-72 50..180 13..143
EglPrx167 172 5e-55 1..180 40..222
EcamPrx[P]166 170 4e-54 1..180 38..220
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 63..601 539  
join(63..601)


exon

Literature and cross-references EcamPrx[P]171 ( EcC052562.10)
Protein sequence: EcamPrx[P]171 ( EcC052562.10)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   178
PWM (Da):   %s   19596.89  
PI (pH):   %s   9.3
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
LGRGSWPRRR DLTTTSLGAA NIDLLAPILD LSYPTPLSPR RIHCQRNGGT LDIPHTIGKA RHATFQS*LY N*SNINSSFI TSLKADCLSS GGDKNLSHPE VTSPTSFDNS YFCNVVSQKx 
LLHLDQRLFS GDLMDHQVTI YLNNLDLFWS NFANATVKMG GLSSLNRFSD HIRMNCRKVN 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Incorrect prediction from kazusa (5' end is missing; stop in frame).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTAGGGCGAG GTTCATGGCC AAGAAGAAGA GATTTGACCA CGACGAGTCT AGGCGCCGCT AATATCGACC TCCTAGCTCC AATTCTTGAT CTTAGCTACC CAACACCTCT TTCTCCAAGA  AGAATTCATT GCCAAAGAAA TGGTGGCACT CTCGATATCC CACACACCAT AGGCAAGGCC AGACACGCGA CATTCCAGTC CTGACTCTAC AACTAAAGCA ACATAAACTC ATCGTTCATC  ACATCTTTAA AGGCTGATTG CCTTAGCTCA GGAGGCGACA AAAACCTCTC CCATCCTGAA GTCACGAGCC CTACATCCTT TGACAACAGC TACTTCTGCA ACGTGGTGAG CCAAAAGGCn  TTACTTCACT TAGACCAACG TCTGTTTAGT GGGGATTTGA TGGACCATCA AGTGACCATA TACCTCAACA ATTTGGATTT GTTCTGGAGC AACTTTGCTA ATGCCACGGT CAAGATGGGA 
GGCCTTAGCT CTCTTAACAG GTTTAGTGAT CATATAAGGA TGAATTGTAG GAAGGTCAAT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTAGGGCGAG GTTCATGGCC AAGAAGAAGA GATTTGACCA CGACGAGTCT AGGCGCCGCT AATATCGACC TCCTAGCTCC AATTCTTGAT CTTAGCTACC CAACACCTCT TTCTCCAAGA  AGAATTCATT GCCAAAGAAA TGGTGGCACT CTCGATATCC CACACACCAT AGGCAAGGCC AGACACGCGA CATTCCAGTC CTGACTCTAC AACTAAAGCA ACATAAACTC ATCGTTCATC  ACATCTTTAA AGGCTGATTG CCTTAGCTCA GGAGGCGACA AAAACCTCTC CCATCCTGAA GTCACGAGCC CTACATCCTT TGACAACAGC TACTTCTGCA ACGTGGTGAG CCAAAAGGCn  TTACTTCACT TAGACCAACG TCTGTTTAGT GGGGATTTGA TGGACCATCA AGTGACCATA TACCTCAACA ATTTGGATTT GTTCTGGAGC AACTTTGCTA ATGCCACGGT CAAGATGGGA 
GGCCTTAGCT CTCTTAACAG GTTTAGTGAT CATATAAGGA TGAATTGTAG GAAGGTCAAT 

Retrieve as FASTA