Entry information : EcamPrx[P]81 (EcC054530.30)
Entry ID 10438
Creation 2012-01-30 (Qiang Li)
Last sequence changes 2013-02-06 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Li
Last annotation changes 2013-05-23 (Li)
Peroxidase information: EcamPrx[P]81 (EcC054530.30)
Name (synonym) EcamPrx[P]81 (EcC054530.30)
Class Class III peroxidase     [Orthogroup: Prx034]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamPrx[P]81
start..stop
S start..stop
EcamPrx78 234 1e-78 1..132 27..158
EglPrx81 228 3e-76 1..132 27..158
EgrPrx81 228 3e-76 1..132 27..158
EgrPrx[P]79 220 9e-76 1..132 15..146
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2..397 396  
join(2..397)


exon

Literature and cross-references EcamPrx[P]81 (EcC054530.30)
Protein sequence: EcamPrx[P]81 (EcC054530.30)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   131
PWM (Da):   %s   14320.15  
PI (pH):   %s   5.75
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
QPNRSTAVAA ANAMGRHCQM SFDYYAKLCP QVEQLIESVT SQ*FKEAPVS GPATIWLFFH DYFVEGCDGS ILISSKPRSK ELAEKDTIDN KDLRAEGFET IAKAKSLVEN KCRGIVSCAD 
ILAIAARDFV HL 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Incorrect prediction from kazusa (5' and 3' end are missing; stop in frame).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CAGCCAAACC GATCCACCGC AGTTGCTGCC GCCAATGCCA TGGGCCGCCA CTGCCAGATG TCGTTCGACT ACTACGCCAA GTTGTGCCCC CAGGTCGAGC AACTCATCGA GTCCGTCACG  AGCCAGTAGT TCAAGGAAGC ACCGGTCTCT GGGCCGGCAA CCATCTGGCT CTTCTTCCAT GACTACTTCG TTGAGGGATG CGACGGATCG ATATTGATAT CGAGCAAGCC CAGAAGCAAG  GAGCTGGCCG AGAAGGACAC GATTGACAAC AAAGATTTGA GGGCGGAGGG ATTCGAGACA ATCGCGAAAG CCAAGTCCTT GGTGGAAAAT AAATGTCGCG GCATCGTTTC TTGTGCTGAC 
ATTCTTGCCA TCGCTGCCAG AGACTTTGTC CACCTG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CAGCCAAACC GATCCACCGC AGTTGCTGCC GCCAATGCCA TGGGCCGCCA CTGCCAGATG TCGTTCGACT ACTACGCCAA GTTGTGCCCC CAGGTCGAGC AACTCATCGA GTCCGTCACG  AGCCAGTAGT TCAAGGAAGC ACCGGTCTCT GGGCCGGCAA CCATCTGGCT CTTCTTCCAT GACTACTTCG TTGAGGGATG CGACGGATCG ATATTGATAT CGAGCAAGCC CAGAAGCAAG  GAGCTGGCCG AGAAGGACAC GATTGACAAC AAAGATTTGA GGGCGGAGGG ATTCGAGACA ATCGCGAAAG CCAAGTCCTT GGTGGAAAAT AAATGTCGCG GCATCGTTTC TTGTGCTGAC 
ATTCTTGCCA TCGCTGCCAG AGACTTTGTC CACCTG 

Retrieve as FASTA