Entry information : EcamPrx[P]11 ( EcC010280.10)
Entry ID 10442
Creation 2012-01-30 (Qiang Li)
Last sequence changes 2013-02-06 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Achraf Jemmat
Last annotation changes 2016-03-23 (Achraf Jemmat)
Peroxidase information: EcamPrx[P]11 ( EcC010280.10)
Name (synonym) EcamPrx[P]11 ( EcC010280.10)
Class Class III peroxidase     [Orthogroup: Prx046]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamPrx[P]11
start..stop
S start..stop
EgrPrx[P]11 266 2e-91 10..137 200..327
EglPrx[P]11 259 1e-89 12..137 122..247
EgrPrx[P]06 260 8e-89 8..137 202..332
EglPrx[P]06 226 1e-75 2..137 188..307
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..411 411  
join(1..411)


exon

Literature and cross-references EcamPrx[P]11 ( EcC010280.10)
Protein sequence: EcamPrx[P]11 ( EcC010280.10)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   135
PWM (Da):   %s   14986.19  
PI (pH):   %s   6.24
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGHSLGKTSC SFIPDRLYDF NKTGEPDPSM DSTFLSQLRE QCPPNSTNLA YLNPDLGSSY SFGNSFYSRV RHHQAVLGIN QQIASNFDSS LIAWEYDVRF GDFQKMFGMS TIRMGNIKLL 
PEDQG*IRKN C*VVDGK 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Incorrect prediction from kazusa (5' end is missing due to NNNNNN; stops in frame).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGGGGGCATT CACTGGGCAA GACCAGTTGC AGCTTCATCC CGGACAGGTT GTACGATTTC AACAAAACTG GCGAGCCAGA CCCAAGCATG GACTCAACCT TCTTGTCCCA ATTGAGGGAG  CAATGCCCTC CGAACTCAAC GAATCTAGCG TACCTCAACC CTGACTTAGG CTCGAGCTAC AGCTTCGGCA ATTCCTTCTA CTCAAGGGTA CGGCACCACC AGGCGGTCCT CGGCATCAAC  CAGCAGATCG CTAGCAACTT CGACAGCTCC CTGATCGCTT GGGAGTATGA TGTCAGATTC GGGGACTTCC AGAAGATGTT CGGCATGTCA ACAATCCGGA TGGGGAACAT CAAGCTCCTA 
CCGGAGGATC AGGGGTAGAT TCGCAAGAAT TGCTGAGTCG TGGACGGGAA A 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GGGGGGCATT CACTGGGCAA GACCAGTTGC AGCTTCATCC CGGACAGGTT GTACGATTTC AACAAAACTG GCGAGCCAGA CCCAAGCATG GACTCAACCT TCTTGTCCCA ATTGAGGGAG  CAATGCCCTC CGAACTCAAC GAATCTAGCG TACCTCAACC CTGACTTAGG CTCGAGCTAC AGCTTCGGCA ATTCCTTCTA CTCAAGGGTA CGGCACCACC AGGCGGTCCT CGGCATCAAC  CAGCAGATCG CTAGCAACTT CGACAGCTCC CTGATCGCTT GGGAGTATGA TGTCAGATTC GGGGACTTCC AGAAGATGTT CGGCATGTCA ACAATCCGGA TGGGGAACAT CAAGCTCCTA 
CCGGAGGATC AGGGGTAGAT TCGCAAGAAT TGCTGAGTCG TGGACGGGAA A 

Retrieve as FASTA