Entry information : EcamPrx[P]173 ( EcC010787.10)
Entry ID 10443
Creation 2012-01-30 (Qiang Li)
Last sequence changes 2013-02-06 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-11 (Christophe Dunand)
Peroxidase information: EcamPrx[P]173 ( EcC010787.10)
Name (synonym) EcamPrx[P]173 ( EcC010787.10)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamPrx[P]173
start..stop
S start..stop
EgrPrx[P]173 103 1e-30 1..52 6..57
GmPrx66 95 2e-25 1..85 187..271
GmPrx37 95 2e-25 1..85 200..284
MePrx66 93 8e-25 1..85 201..285
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..265 265  
join(1..265)


exon

Literature and cross-references EcamPrx[P]173 ( EcC010787.10)
Protein sequence: EcamPrx[P]173 ( EcC010787.10)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   89
PWM (Da):   %s   9567.58  
PI (pH):   %s   7.25
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

FTNRLYNFTG KGNTNPTLNS TYATYLMGEC STSDMTTTMA VDPGSSRSFD KAxYCPILLK SMGLFQFDAA LFDQQASRHI ASQLLGLQL 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Incorrect prediction from kazusa (5' end is missing; stop in frame).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTCACCAATA GGCTCTACAA CTTCACCGGA AAGGGCAACA CCAACCCCAC CCTCAACTCC ACCTATGCCA CCTACTTAAT GGGCGAGTGC AGCACTTCCG ACATGACCAC CACCATGGCC  GTCGACCCCG GTAGCTCCCG GAGCTTCGAT AAGGCACnnT ACTGCCCCAT TCTACTTAAA AGCATGGGCC TCTTCCAATT CGATGCTGCT CTTTTTGACC AACAAGCGAG CCGCCACATC 
GCGTCCCAGT TGCTCGGACT TCAACTA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTCACCAATA GGCTCTACAA CTTCACCGGA AAGGGCAACA CCAACCCCAC CCTCAACTCC ACCTATGCCA CCTACTTAAT GGGCGAGTGC AGCACTTCCG ACATGACCAC CACCATGGCC  GTCGACCCCG GTAGCTCCCG GAGCTTCGAT AAGGCACnnT ACTGCCCCAT TCTACTTAAA AGCATGGGCC TCTTCCAATT CGATGCTGCT CTTTTTGACC AACAAGCGAG CCGCCACATC 
GCGTCCCAGT TGCTCGGACT TCAACTA 

Retrieve as FASTA