Entry information : EcamPrx[P]186 ( EcC020752.60)
Entry ID 10452
Creation 2012-01-30 (Qiang Li)
Last sequence changes 2013-02-06 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-05-11 (Christophe Dunand)
Peroxidase information: EcamPrx[P]186 ( EcC020752.60)
Name (synonym) EcamPrx[P]186 ( EcC020752.60)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamPrx[P]186
start..stop
S start..stop
EgrPrx[P]186 299 6e-106 5..175 1..171
EguPrx[P]186 290 2e-102 1..175 1..175
EglPrx[P]186 148 2e-47 97..169 1..73
EcamPrx[P]171 133 3e-40 30..175 34..180
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 3..527 525  
join(3..527)


exon

Literature and cross-references EcamPrx[P]186 ( EcC020752.60)
Protein sequence: EcamPrx[P]186 ( EcC020752.60)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   168
PWM (Da):   %s   18769.02  
PI (pH):   %s   10.9
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
S*PGRRD*P* QA*ALLISTS QLQFLISTTP SPLSSTRIHC QRNGGALGIP HHRQGQAHDI PVPALQLKRH KLIVHHIFKG *LP*LRKQQK ALPS*SHEPY ILRQQLLAQL GEPKGLLHLD 
QHLFSGDLMD HQVTVYLNNL DLIWSNFANA MVKMGGLSHL TKFSDHIRMN CRKVN 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Incorrect prediction from kazusa (5' end is missing; stops in frame).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TCATGACCAG GAAGAAGAGA TTGACCATGA CAAGCCTAAG CATTGCTAAT ATCGACCTCC CAGCTCCAAT TCTTGATCTC AACTACCCCA TCACCTCTTT CTTCAACAAG GATTCATTGT  CAAAGAAATG GTGGCGCTCT CGGTATCCCA CACCATAGGC AAGGTCAGGC ACACGACATT CCAGTCCCGG CTCTACAACT AAAGCGACAT AAACTCATCG TTCATCACAT CTTTAAAGGC  TGATTGCCTT AGCTCAGGAA GCAACAAAAA GCTCTCCCAT CCTGAAGTCA TGAGCCTTAC ATCCTTCGAC AACAGCTACT TGCGCAACTT GGTGAGCCAA AAGGCCTACT CCACTTAGAC  CAACATCTGT TTAGTGGGGA TTTGATGGAC CATCAAGTGA CTGTATACCT CAACAATTTG GATTTGATCT GGAGCAACTT TGCTAATGCC ATGGTCAAGA TGGGAGGCCT TAGCCATCTT 
ACCAAGTTTA GTGATCATAT AAGGATGAAT TGTAGGAAGG TCAAT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TCATGACCAG GAAGAAGAGA TTGACCATGA CAAGCCTAAG CATTGCTAAT ATCGACCTCC CAGCTCCAAT TCTTGATCTC AACTACCCCA TCACCTCTTT CTTCAACAAG GATTCATTGT  CAAAGAAATG GTGGCGCTCT CGGTATCCCA CACCATAGGC AAGGTCAGGC ACACGACATT CCAGTCCCGG CTCTACAACT AAAGCGACAT AAACTCATCG TTCATCACAT CTTTAAAGGC  TGATTGCCTT AGCTCAGGAA GCAACAAAAA GCTCTCCCAT CCTGAAGTCA TGAGCCTTAC ATCCTTCGAC AACAGCTACT TGCGCAACTT GGTGAGCCAA AAGGCCTACT CCACTTAGAC  CAACATCTGT TTAGTGGGGA TTTGATGGAC CATCAAGTGA CTGTATACCT CAACAATTTG GATTTGATCT GGAGCAACTT TGCTAATGCC ATGGTCAAGA TGGGAGGCCT TAGCCATCTT 
ACCAAGTTTA GTGATCATAT AAGGATGAAT TGTAGGAAGG TCAAT 

Retrieve as FASTA