Entry information : EcamPrx[P]184 (EcC022949.10)
Entry ID 10455
Creation 2012-01-30 (Qiang Li)
Last sequence changes 2013-02-06 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Qiang Li
Last annotation changes 2013-10-30 (Qiang Li)
Peroxidase information: EcamPrx[P]184 (EcC022949.10)
Name (synonym) EcamPrx[P]184 (EcC022949.10)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamPrx[P]184
start..stop
S start..stop
EgrPrx[P]184 194 1e-66 2..96 1..95
EguPrx[P]184 165 3e-55 2..96 1..95
EgrPrx45 115 4e-33 17..95 243..321
EglPrx45 115 4e-33 17..95 243..321
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2..289 288  
join(2..289)


exon

Literature and cross-references EcamPrx[P]184 (EcC022949.10)
Protein sequence: EcamPrx[P]184 (EcC022949.10)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   94
PWM (Da):   %s   10111.04  
PI (pH):   %s   8.03
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

LFADLP*SEA SCSSGTPSLN MTDTSYYQGI PPNRGFFTCD QILLTNSAIA NQAIQNARNP FI*KNNFAAT MVKMGKIVDL TGSIEEIRAK CRVING 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Incorrect prediction from kazusa (Stop in frame; 5' end is missing). Close to EcC027461.10 (Removed).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CTGTTTGCAG ACTTACCGTA ATCTGAAGCT AGCTGTTCCA GTGGAACCCC TAGCCTGAAC ATGACGGATA CAAGTTATTA TCAGGGCATA CCTCCGAATC GAGGCTTCTT CACATGTGAC  CAGATACTCC TCACAAACTC TGCAATTGCA AACCAAGCTA TTCAAAATGC AAGAAATCCA TTCATTTGAA AGAACAATTT TGCTGCTACA ATGGTGAAGA TGGGTAAAAT TGTTGACTTG 
ACTGGAAGTA TTGAGGAGAT TCGAGCAAAG TGCAGGGTCA TTAATGGC 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CTGTTTGCAG ACTTACCGTA ATCTGAAGCT AGCTGTTCCA GTGGAACCCC TAGCCTGAAC ATGACGGATA CAAGTTATTA TCAGGGCATA CCTCCGAATC GAGGCTTCTT CACATGTGAC  CAGATACTCC TCACAAACTC TGCAATTGCA AACCAAGCTA TTCAAAATGC AAGAAATCCA TTCATTTGAA AGAACAATTT TGCTGCTACA ATGGTGAAGA TGGGTAAAAT TGTTGACTTG 
ACTGGAAGTA TTGAGGAGAT TCGAGCAAAG TGCAGGGTCA TTAATGGC 

Retrieve as FASTA