Entry information : EgrPrx[P]89
Entry ID 10473
Creation 2012-02-07 (Qiang Li)
Last sequence changes 2012-02-16 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-11 (Christophe Dunand)
Peroxidase information: EgrPrx[P]89
Name EgrPrx[P]89
Class Class III peroxidase     [Orthogroup: Prx010]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx[P]89
start..stop
S start..stop
EcamPrx[P]89 531 0 10..291 1..283
BvPrx02 414 1e-146 1..291 74..365
CclPrx113 412 4e-146 1..291 27..318
VvPrx35 412 5e-146 1..291 35..326
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 5056782..5056916 135 N° 2 5057439..5057627 189 N° 3 5058002..5058167 166 N° 4 5058331..5058713 383
join(5056782..5056916,5057439..5057627,5058002..5058167,5058331..5058713)


exon

Literature and cross-references EgrPrx[P]89
DNA ref. Phytozome 12:   scaffold_6 (5056782..5058713)
Protein sequence: EgrPrx[P]89
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   290
PWM (Da):   %s   30820.01  
PI (pH):   %s   4.51
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
SANFYVSSCPLALSIIQDAVNTVASSEPRMGASLPRLHFHDCFVNGCDGSVLLDDTDGFTGEKTAGGNVNSIRGLDVVDYIKTRLEEQCPGIVSCADILAAAARDSVVLGGPTWTVQLGRRDSTTASLSAANSDIPSPLSDLNVLISDFAEKGFSAKEMVALSGTHMIGRARSFLFRARIYNEENINPTFATS*RQNCPGAGGDDNLVPLETGDGDMFDNNYFKDLVSMKGLLHSDQQLFNNGSADRQVKAYSLDSASFFADLADAMVKMGNLSPLTGTDGEVRTNCRKV

Retrieve as FASTA  
Remarks Pseudogene from genomic (Short 5' end is missing and Stop in frame). No prediction from Phytozome. No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TCAGCGAACTTTTACGTGAGCTCGTGTCCTTTGGCTCTGTCCATTATCCAGGACGCCGTGAACACGGTGGCGTCCTCAGAGCCCCGAATGGGAGCCTCGCTTCCGCGTCTTCACTTCCAC
GATTGCTTTGTCAAT
GCAAGTTCTATTTTTACTCTTCATGTGTCGTCTTCATCATCAAAGTTCCACCGAAGACATCACTTTGCCATGGCAGATCCAGAACTTAGTATTCAATCCGTGGGT
TAAATAGTAGATCGAACACTTGTGTTACAGTTTGAGCCCAGACAAGTTTTCAATCAACTTTGTATGCTTCCGAGAACCTTTCATGAGGAGCACAGTAAGACGAACCTAGCATTATACAAT
TCCCTGCGCGGAAAAAAAAAAAAAAAAAAAACACATGACTAGGTTCACGCTGCCACTTCATACAAACGAAAGACGAAAAATGAGGCGAGTCTTCAGTAAATGTCACGACCCAATTTCGTA
TCGCGTTGTTTTTCCTAGATTATAAATGTCATATTCAGTCCTAGTCGATTCTTCTGCTTCCGTCCAAGCTGCTTTATCTGTCGAACTTTGTTCAAGCATAGAGGGAGCAAACGAGGTTGA
AGCAAAAGCTTAATGGCTTGTCCACAAAAAAATCTAATGATATCGAGGTTTAAACAGGGTTGCGACGGGTCTGTGTTGTTGGACGACACGGATGGATTCACCGGCGAGAAGACGGCTGGC
GGCAATGTAAATTCAATCAGGGGTTTGGACGTGGTCGACTACATCAAGACTCGGCTTGAAGAACAATGCCCTGGGATCGTATCGTGTGCTGACATCCTAGCCGCCGCAGCCCGCGATTCT
GTCGTT
GCGGTAAGATGCCTTTTCTACTTGTATAGAAACACGAGATACCCTTCTGATCATCTCTCGAAAAAGAAGGGAGACCGAAAATCTCTCGATAAGCTCTCATTTCTTCTTAACACG
GCATGACAAACCAATTAATATTCTCATAAAATATAGTGGTTATGTGCTCCAACAATTATAGATTCTCCATATTGATTGGTCAGACATGGCAGTATTGGCAAAGAATATTACTTTCCATGC
CCATGGCGATGCATTAATCGATGATTTCGGAAAATATGTTACTCCAAGTATAGTCTTATATCCCTTTTTTCATCAACAAGACAGAAGGTGATTATGATCAGATTGATTATACTAATTGGG
GATCATGCAATAATTTTCAGTTGGGTGGACCTACGTGGACCGTTCAACTAGGCAGGAGAGATTCAACCACGGCAAGTTTGAGCGCTGCAAACAGCGATATTCCTTCGCCCCTCTCGGACC
TTAATGTTCTCATATCTGACTTCGCTGAGAAGGGATTCTCTGCCAAAGAAATGGTCGCCCTCTCAG
GTGTTTCATCTAATTTACTTGGCCTTGGCAAAAAATGTCATTAATCTAAGAGAG
AAGTATCGTTCTTTTGGTCTTCGCACTCTGGAAAGGCTTTCTCTGATTGTTGCTGAAAGAAAATCGCCCGACTATGATCCACCGTCGTACATGCGCTTTTGTGCCGCAGGAACTCACATG
ATAGGCCGAGCGAGGAGCTTCCTGTTCCGTGCTCGCATCTACAACGAGGAGAACATCAACCCCACATTCGCCACGTCGTAGAGGCAGAACTGTCCCGGTGCAGGCGGGGATGATAATCTC
GTGCCGCTTGAGACCGGCGACGGTGACATGTTCGACAATAACTACTTCAAGGACCTAGTGAGCATGAAGGGCCTCCTGCACTCGGACCAGCAGCTGTTCAACAACGGATCCGCCGACAGG
CAGGTGAAGGCCTACAGCCTCGACTCGGCCTCCTTCTTCGCCGATCTGGCCGATGCCATGGTGAAGATGGGGAACCTCAGCCCCCTCACAGGAACGGATGGGGAAGTCAGGACCAACTGC
AGGAAAGTTAAT

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TCAGCGAACTTTTACGTGAGCTCGTGTCCTTTGGCTCTGTCCATTATCCAGGACGCCGTGAACACGGTGGCGTCCTCAGAGCCCCGAATGGGAGCCTCGCTTCCGCGTCTTCACTTCCAC
GATTGCTTTGTCAAT
GGTTGCGACGGGTCTGTGTTGTTGGACGACACGGATGGATTCACCGGCGAGAAGACGGCTGGCGGCAATGTAAATTCAATCAGGGGTTTGGACGTGGTCGACTAC
ATCAAGACTCGGCTTGAAGAACAATGCCCTGGGATCGTATCGTGTGCTGACATCCTAGCCGCCGCAGCCCGCGATTCTGTCGTT
TTGGGTGGACCTACGTGGACCGTTCAACTAGGCAGG
AGAGATTCAACCACGGCAAGTTTGAGCGCTGCAAACAGCGATATTCCTTCGCCCCTCTCGGACCTTAATGTTCTCATATCTGACTTCGCTGAGAAGGGATTCTCTGCCAAAGAAATGGTC
GCCCTCTCAG
GAACTCACATGATAGGCCGAGCGAGGAGCTTCCTGTTCCGTGCTCGCATCTACAACGAGGAGAACATCAACCCCACATTCGCCACGTCGTAGAGGCAGAACTGTCCCGGT
GCAGGCGGGGATGATAATCTCGTGCCGCTTGAGACCGGCGACGGTGACATGTTCGACAATAACTACTTCAAGGACCTAGTGAGCATGAAGGGCCTCCTGCACTCGGACCAGCAGCTGTTC
AACAACGGATCCGCCGACAGGCAGGTGAAGGCCTACAGCCTCGACTCGGCCTCCTTCTTCGCCGATCTGGCCGATGCCATGGTGAAGATGGGGAACCTCAGCCCCCTCACAGGAACGGAT
GGGGAAGTCAGGACCAACTGCAGGAAAGTTAAT

Retrieve as FASTA