Entry information : EgrPrx[P]171
Entry ID 10477
Creation 2012-02-08 (Qiang Li)
Last sequence changes 2012-02-16 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-11 (Christophe Dunand)
Peroxidase information: EgrPrx[P]171
Name EgrPrx[P]171
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx[P]171
start..stop
S start..stop
EguPrx[P]171 261 5e-92 1..143 1..143
EcamPrx[P]171 212 6e-72 13..143 50..180
EguPrx29 173 6e-55 1..143 180..322
EgrPrx29 173 7e-55 1..143 180..322
Literature and cross-references EgrPrx[P]171
DNA ref. Phytozome 12:   scaffold_11 (15943807..15943381)
Protein sequence: EgrPrx[P]171
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   142
PWM (Da):   %s   15795.12  
PI (pH):   %s   10.23
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
FLQQGFIAKE MVALLVSHTI GKARHTTFRS RLYN*SNINS LFITSLKADC LSSGGDKNLS HLEVMSLTSF DNSYLRNLVS xKGLLHLDQR LFSGDLMDHQ VTVYLNNLDL FWSxLANAMV 
MMGGLSHLTR FSDHIRMNRR KVN 

Retrieve as FASTA  
Remarks Pseudogene from genomic (5' is missing, Stop in frame). No prediction from phytozome. No EST. complement(join(15943381..15943807)).
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTTCTCCAAC AAGGATTCAT TGCCAAAGAA ATGGTGGCAC TCTTGGTATC CCACACCATA GGCAAGGCCA GGCACACTAC ATTCCGATCC CGGCTCTACA ACTAAAGCAA CATAAACTCA  TTGTTCATCA CATCTTTAAA GGCTGATTGC CTTAGCTCAG GAGGCGACAA AAACCTCTCC CATCTTGAAG TCATGAGCCT TACATCCTTC GACAACAGCT ACTTGCGCAA CTTGGTGAGC  CAnAAAGGCC TACTCCACTT AGACCAACGC TTGTTTAGTG GGGATTTGAT GGACCATCAA GTGACCGTAT ACCTCAACAA TTTGGATTTG TTCTGGAGCA AnCTTGCTAA TGCAATGGTC 
ATGATGGGAG GCCTTAGCCA TCTTACCAGG TTTAGTGATC ATATAAGGAT GAATCGTAGG AAGGTCAAT 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTTCTCCAAC AAGGATTCAT TGCCAAAGAA ATGGTGGCAC TCTTGGTATC CCACACCATA GGCAAGGCCA GGCACACTAC ATTCCGATCC CGGCTCTACA ACTAAAGCAA CATAAACTCA  TTGTTCATCA CATCTTTAAA GGCTGATTGC CTTAGCTCAG GAGGCGACAA AAACCTCTCC CATCTTGAAG TCATGAGCCT TACATCCTTC GACAACAGCT ACTTGCGCAA CTTGGTGAGC  CAnAAAGGCC TACTCCACTT AGACCAACGC TTGTTTAGTG GGGATTTGAT GGACCATCAA GTGACCGTAT ACCTCAACAA TTTGGATTTG TTCTGGAGCA AnCTTGCTAA TGCAATGGTC 
ATGATGGGAG GCCTTAGCCA TCTTACCAGG TTTAGTGATC ATATAAGGAT GAATCGTAGG AAGGTCAAT 

Retrieve as FASTA