Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
142 |
PWM (Da): |
15795.12 |
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PI (pH):
| 10.23 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
FLQQGFIAKE MVALLVSHTI GKARHTTFRS RLYN*SNINS LFITSLKADC LSSGGDKNLS HLEVMSLTSF DNSYLRNLVS xKGLLHLDQR LFSGDLMDHQ VTVYLNNLDL FWSxLANAMV
MMGGLSHLTR FSDHIRMNRR KVN
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Retrieve as FASTA
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Remarks |
Pseudogene from genomic (5' is missing, Stop in frame). No prediction from phytozome. No EST. complement(join(15943381..15943807)). |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TTTCTCCAAC AAGGATTCAT TGCCAAAGAA ATGGTGGCAC TCTTGGTATC CCACACCATA GGCAAGGCCA GGCACACTAC ATTCCGATCC CGGCTCTACA ACTAAAGCAA CATAAACTCA
TTGTTCATCA CATCTTTAAA GGCTGATTGC CTTAGCTCAG GAGGCGACAA AAACCTCTCC CATCTTGAAG TCATGAGCCT TACATCCTTC GACAACAGCT ACTTGCGCAA CTTGGTGAGC
CAnAAAGGCC TACTCCACTT AGACCAACGC TTGTTTAGTG GGGATTTGAT GGACCATCAA GTGACCGTAT ACCTCAACAA TTTGGATTTG TTCTGGAGCA AnCTTGCTAA TGCAATGGTC
ATGATGGGAG GCCTTAGCCA TCTTACCAGG TTTAGTGATC ATATAAGGAT GAATCGTAGG AAGGTCAAT
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TTTCTCCAAC AAGGATTCAT TGCCAAAGAA ATGGTGGCAC TCTTGGTATC CCACACCATA GGCAAGGCCA GGCACACTAC ATTCCGATCC CGGCTCTACA ACTAAAGCAA CATAAACTCA
TTGTTCATCA CATCTTTAAA GGCTGATTGC CTTAGCTCAG GAGGCGACAA AAACCTCTCC CATCTTGAAG TCATGAGCCT TACATCCTTC GACAACAGCT ACTTGCGCAA CTTGGTGAGC
CAnAAAGGCC TACTCCACTT AGACCAACGC TTGTTTAGTG GGGATTTGAT GGACCATCAA GTGACCGTAT ACCTCAACAA TTTGGATTTG TTCTGGAGCA AnCTTGCTAA TGCAATGGTC
ATGATGGGAG GCCTTAGCCA TCTTACCAGG TTTAGTGATC ATATAAGGAT GAATCGTAGG AAGGTCAAT
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Retrieve as FASTA
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