Entry information : EgrPrx[P]165
Entry ID 10482
Creation 2012-02-08 (Qiang Li)
Last sequence changes 2012-02-16 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-11 (Christophe Dunand)
Peroxidase information: EgrPrx[P]165
Name EgrPrx[P]165
Class Class III peroxidase     [Orthogroup: Prx013]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrPrx[P]165
start..stop
S start..stop
EglPrx[P]165 396 5e-142 6..281 1..210
EgrPrx126 395 8e-140 1..281 34..310
EguPrx126 395 1e-139 1..281 34..310
EglPrx126 392 1e-138 1..281 34..310
Literature and cross-references EgrPrx[P]165
DNA ref. Phytozome 11:   scaffold_11 (14144914..14147064)
Protein sequence: EgrPrx[P]165
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   280
PWM (Da):   %s   30191.32  
PI (pH):   %s   8.29
Sequence
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Send to Peroxiscan
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QSSCPEGEKI VREIAWRKSE ADPTLGAKLL RLHFHNCFVQ GCDGSILLDS AGKNQSGKTV VPNLTVGGFD VIDDIKKAVE EVCPDTRSRA DIIALAARDA ISFPVK*NLL DWKLFSAKRT  EHKLAANVLG NIPSPFQDFN ALAxIFSKKG LNMNDLVVLS GSGAHSIGVA HCGTFSRRLY NFTGKGDTNP SLNATYAALL QNRCPNPTNL ATVVEMDPxQ SSLSFNNHCF DILMENKGLF 
QSDVALSMNR DAAKVVQQLR MPATFFSEFG KSMKKMEAIT V 

Retrieve as FASTA  
Remarks Pseudogene from genomic (5' end is missing, stops in frame). No prediction from Phytozome. No EST. join(14144914..14145033,14145119..14145333,14146398..14146542,14146705..14147064).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CAATCGAGTT GCCCTGAAGG TGAAAAGATC GTGAGGGAGA TCGCTTGGAG GAAATCTGAA GCTGACCCTA CGTTGGGTGC GAAGCTTCTC AGGCTTCACT TCCACAACTG TTTTGTGCAG  GTAACAAATC CCAATGTCCC GTAGATTCAA ATTTCTCTCA TTCACATTAA GGATTGATGA TATTGTGGCA ATAATCAAAT CTTCGGGTTG CGATGGGTCT ATACTGTTGG ACTCTGCGGG  GAAGAATCAG TCTGGGAAGA CCGTCGTCCC AAATCTCACG GTCGGTGGCT TTGATGTCAT TGATGACATC AAGAAAGCAG TGGAGGAAGT TTGCCCTGAC ACTAGGTCTC GTGCGGATAT  TATTGCTCTA GCCGCTCGCG ATGCCATCTC TTTTCCGGTA AAATAAAATC TGCTTGATTG GTTGTCTAAA ATATAATTTT CTTCACAAAA AATGGTCACC ATATGAAGTT AAACGTGTGG  TGTAAATTGC AGTTTAAGAA GCCAATGTGA GATGTACTGA CATGAAGAGA TGGCAACGTT AATGCTCCGT TCGTTTCACG GAAAATATCA TGTTTCCGGA AAACATTTTC CTGGAAGTTA  TTTTCTAGGA AAATGACTCT ATTTTCCGGT GTTCGGCCAA ATCTAAAATT TGAGTGGAAA ATATTTTCCA CTGTTCGTTA GCTCAAACAT TTTCCAGAAA AAAATTATCA AAAATTGAAT  TTTAATATTT TTAATTGACC AAAAAATTTA TTTTATTTAT TTATATTTTT TTAAATGATT TTTTTAAATT ATTTATATTT TTAAAATAGA AATTTTTATT AATTTTTTTT TCCTTCCTCC  TTCCTCCTCC TTCTTCCTCC CCATTCCGCC GCCGCCGCCT CCTTCCTGCC TGACGATGGT CGACTGCCTA GCGGCCGACC AAGACCCGGT GGCCACTCCG ACGAGCTCGA GGCTCGGCCG  ATCTCACCCG AGCTCGTCGG ATCTGGTGAC AGAGCTCGAG CTCGCCTGGA TCCGGCGAGC CGCGAGCTCC GCCGCCAGAT CCGGCGAGCT CGAGGCTCGG CCGATCTCAC CCGAGCTCGC  CGGATTTGGT GACAGATCTC CCCGCGAGCC TCCCGGCGCC GCCGCGGAGC TCCCTCTTGA GCCGGATCCT CCCGAGCGGC TTCGAGCCGC CGGGGAAGCG GAGCGCGGCG GTGGCGGCGG  CGCCCCGGCC GGAGCAGGCG GGCAGGAGCG GCCAGGGAGG GCGGAGGCTG GTCTCGGAGA AGGACGTCGT CGAAGCCGAC TTCGCAGCAA GGAGAGCAAG AGAGAGAGAA CAAGAACCGA  AGGAAGAGAA GAGGCGAGGC TTGGAAAATG TTTTCCTCTT TTGAAAAGAG GAAAACATTT TCCAAGCTGC AAAGAAGGAA TTTTCCGGTC AATGGAAAAT GTTTTCCGTT GACCGTGATT  TTCCGCTCAC CCGAACACCG GAAAATTCGG AAAATATTTT CCTGGAAGTT ATTTTCCGCA AAACGAACGG AGCATAAGTT AGCGGCCAAC GTGTTAGGGA ATATTCCATC TCCTTTCCAA  GACTTCAATG CCCTTGCACA nATTTTCTCA AAGAAAGGCC TCAATATGAA CGATCTCGTC GTTCTCTCAG GTAAACTAAC ATGACCTTTT TTCGGATTAT CGAGTTACAA TTTCATGACT  TATATTTGGA TTGTTAAATT AGCATTGAAG CTAATCAAAG TACATAACTT GACATATTGC CTTGAGTTAG ACATTGCACA ATATACTGAA ATCATCTACA TCTTTGTTCC TTGATCAGGT  GCACATTCCA TTGGAGTTGC TCATTGTGGC ACATTTTCTA GGAGGCTCTA CAACTTCACT GGGAAAGGGG ACACAAACCC CTCTCTGAAC GCCACCTACG CTGCATTGCT CCAGAATCGG  TGCCCTAACC CTACCAACCT GGCTACGGTG GTGGAAATGG ATCCACnnCA AAGCTCACTC TCCTTCAATA ACCATTGCTT CGATATTCTC ATGGAAAACA AGGGATTGTT CCAATCCGAC 
GTCGCACTCT CGATGAATCG AGACGCAGCT AAGGTGGTGC AGCAGCTTCG GATGCCGGCC ACGTTTTTCT CCGAGTTTGG CAAGTCGATG AAGAAGATGG AGGCAATAAC CGTC 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CAATCGAGTT GCCCTGAAGG TGAAAAGATC GTGAGGGAGA TCGCTTGGAG GAAATCTGAA GCTGACCCTA CGTTGGGTGC GAAGCTTCTC AGGCTTCACT TCCACAACTG TTTTGTGCAG  GGTTGCGATG GGTCTATACT GTTGGACTCT GCGGGGAAGA ATCAGTCTGG GAAGACCGTC GTCCCAAATC TCACGGTCGG TGGCTTTGAT GTCATTGATG ACATCAAGAA AGCAGTGGAG  GAAGTTTGCC CTGACACTAG GTCTCGTGCG GATATTATTG CTCTAGCCGC TCGCGATGCC ATCTCTTTTC CGGTAAAATA AAATCTGCTT GATTGGAAGT TATTTTCCGC AAAACGAACG  GAGCATAAGT TAGCGGCCAA CGTGTTAGGG AATATTCCAT CTCCTTTCCA AGACTTCAAT GCCCTTGCAC AnATTTTCTC AAAGAAAGGC CTCAATATGA ACGATCTCGT CGTTCTCTCA  GGATCAGGTG CACATTCCAT TGGAGTTGCT CATTGTGGCA CATTTTCTAG GAGGCTCTAC AACTTCACTG GGAAAGGGGA CACAAACCCC TCTCTGAACG CCACCTACGC TGCATTGCTC  CAGAATCGGT GCCCTAACCC TACCAACCTG GCTACGGTGG TGGAAATGGA TCCACnnCAA AGCTCACTCT CCTTCAATAA CCATTGCTTC GATATTCTCA TGGAAAACAA GGGATTGTTC  CAATCCGACG TCGCACTCTC GATGAATCGA GACGCAGCTA AGGTGGTGCA GCAGCTTCGG ATGCCGGCCA CGTTTTTCTC CGAGTTTGGC AAGTCGATGA AGAAGATGGA GGCAATAACC 
GTC 

Retrieve as FASTA