Entry information : EcamRboh06 ( EcC001135.20)
Entry ID 10575
Creation 2012-02-28 (Qiang Li)
Last sequence changes 2013-03-25 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-02-16 (Christophe Dunand)
Peroxidase information: EcamRboh06 ( EcC001135.20)
Name (synonym) EcamRboh06 ( EcC001135.20)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh001]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamRboh06
start..stop
S start..stop
EguRboh06 1764 0 1..857 1..857
EgrRboh06 1761 0 1..857 1..857
EglRboh06 1758 0 1..857 1..857
VvRboh08 1249 0 3..857 11..843
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..370 370 N° 2 474..636 163 N° 3 707..755 49 N° 4 849..962 114
N° 5 1061..1867 807 N° 6 2143..2238 96 N° 7 2329..2444 116 N° 8 2545..2647 103
N° 9 2770..2861 92 N° 10 2941..3151 211 N° 11 3183..3317 135 N° 12 3450..3578 129
N° 13 3653..3731 79 N° 14 3839..3948 110  
join(1..370,474..636,707..755,849..962,1061..1867,2143..2238,2329..2444,2545..26 47,2770..2861,2941..3151,3183..3317,3450..3578,3653..3731,3839..3948)


exon

Literature and cross-references EcamRboh06 ( EcC001135.20)
Protein sequence: EcamRboh06 ( EcC001135.20)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   857
PWM (Da):   %s   98012.41 Transmb domain:   %s   o290-308i423-445o471-493i659-676o
PI (pH):   %s   9.78
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGDSSKWILESIEVDDMADVPLDSSNKSGVHSGGPTSKVNDEAMLARSSSSTRKQVGFQGTGPPVLSRMGRTESGARRGLKSLRFLDRTITGKEVDAWKSMEKRFNQFAVDGRISKDKFGTCIGMGESKEFAGELFDALARRRKIHSENGITQEEMRAFWDDMTNQDIDSRLQIFFDMCDKNGDGKLSEEEVKVIILSASANKLSNLKQQAASYAVLIMEELDPDHLGYIEMWQLETLLREMVSSEEANKLAKKTHTLARTMIPRQYRTPISKFLSKTFEFLQENWKRVWVMSLWLTLNLILFVWKFRQYKERDIFQVMGYCVCFAKGAAETLKFNMALILIPVCRRTLTKLRSTALSRIFPFDDNINFHKSIALAIVIGTSIHIIMHLSCDFPRLISCPKPKFLRYAGPNFDYKQPSYLDLVESVPGITGIIITILMAFSFTLATHSFRRNVIKLAWPFHHLAGFNAFWYAHHLLFLVYALLIVHGYFLFLSRHWYSKSTWMYLSVPLLLYVSERIFTAIDERNHRVNVIKAIIYTGNVLALYISKPPGFKYKSGMYMFVKCPDISNFEWHPFSITSAPGDDYLSVHIRTLGDWTMELKNRFAVCEPPNKPAGRGSLVRLQTKAISDYDPTQVRFPKILIKGPYGAPAQNYKKYDILFLIGLGIGATPFISILKDLLNQIKPNKQNNVSQKFITSNKFSRCRRDPGQSIPGANKKAPERAYFYWVTREQGSFEWFKGVMDDIADYDHNHIIEMHNYLTSVYEEGDARSALIAMVQKLQHAKNGVDVVSESRIRTHFARPNWRKVFSQLASAHPSSRIGVFYCGSPTLTQPLKKLCQEFSLNSSTRFQFHKENF

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from kazusa (Bad prediction at 5' end).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGGGACTCCTCTAAATGGATTCTGGAAAGCATCGAGGTCGACGACATGGCTGATGTGCCCTTGGACAGCTCCAACAAAAGCGGCGTTCATAGCGGCGGCCCGACTTCCAAGGTGAAC
GATGAGGCAATGCTCGCCCGGAGCTCGAGCAGCACGAGGAAGCAAGTTGGGTTTCAGGGCACTGGGCCACCGGTGTTGTCTAGGATGGGAAGGACCGAATCCGGTGCCAGGAGAGGGCTC
AAGAGCTTGAGGTTCTTGGACAGGACCATCACAGGGAAGGAGGTGGACGCTTGGAAGTCCATGGAGAAACGTTTCAACCAATTCGCAGTCGATGGGAGGATCTCGAAGGACAAGTTCGGG
ACCTGCATTG
GTAATTCGACGCTGACTTGGAAACCCCAAGACGGGGTCCTGCTTGAAATCTAACTTTTCCTGGGGAAAAAAGAGCTCAGGGGTTGTGAAATGCTGTGTTGCAGGAATGGG
AGAATCCAAGGAATTTGCGGGGGAGCTGTTTGATGCATTGGCGAGGCGTAGGAAGATACACTCGGAGAACGGGATTACTCAGGAGGAAATGAGGGCGTTTTGGGACGATATGACCAACCA
GGACATCGACTCACGCCTTCAAATCTTCTTTGACAT
GTAAAGAATTGTGCTTTCTGTGTCTCTTGGTTGTGTTGTTCACAGGAAACTAACTTCGCTAGTGTTTCAGGTGTGACAAAAATG
GCGATGGTAAGCTCTCCGAGGAGGAGGTGAAGGAG
GTGAGAGATAGCAACTTCCCAAAATCTCCTCTTCTTGTGTTTTTGGACGCTAATGGATAAAATTCTTTTACCTTTTAATTCTGGC
AAGTGAAGGTAATCATATTGAGCGCTTCAGCAAACAAGCTGTCCAATCTCAAGCAGCAAGCCGCATCCTATGCCGTGTTGATCATGGAAGAGCTCGATCCTGACCATCTTGGGTATATCG
AA
GTGAGTAGAAGTCTAGAGCCATTCCTTGAGAAGTGCATGTTTGTGTGTTCATCTATCGAGTCCTCTCTCTCTCTTCCTAATTTTGCAAGCTTAAGCAGATGTGGCAACTCGAGACTCT
ACTGAGGGAGATGGTGAGCTCCGAAGAAGCCAACAAGCTGGCCAAAAAAACCCACACTCTTGCAAGGACCATGATTCCGAGACAATATAGGACTCCGATCAGCAAATTTCTATCGAAAAC
CTTCGAATTTCTCCAGGAGAATTGGAAGAGAGTGTGGGTCATGTCACTTTGGTTGACTCTAAATTTGATCCTTTTTGTCTGGAAGTTCCGTCAATACAAGGAGAGAGATATATTTCAAGT
CATGGGTTACTGTGTTTGTTTTGCGAAGGGCGCTGCTGAGACGCTCAAATTCAACATGGCCCTTATTCTCATCCCTGTGTGTAGGAGGACGCTTACTAAACTTAGATCAACTGCCCTAAG
TAGGATATTTCCTTTCGACGACAATATTAATTTCCACAAGTCGATAGCACTGGCAATAGTAATCGGGACTTCAATACATATTATTATGCACCTTTCGTGTGATTTCCCAAGACTAATTTC
ATGTCCTAAGCCAAAGTTTTTGAGGTACGCGGGGCCTAACTTTGATTACAAGCAGCCAAGTTACTTGGATCTAGTTGAGAGTGTTCCTGGCATTACCGGGATTATAATTACCATCTTGAT
GGCTTTCTCTTTCACACTGGCCACGCATTCATTTAGAAGGAATGTCATCAAGTTAGCTTGGCCATTCCACCATCTAGCCGGGTTCAATGCCTTCTGGTACGCTCACCATTTGCTGTTCCT
GGTCTATGCTCTCTTGATAGTGCACGGCTACTTCCTGTTTCTGAGTAGGCACTGGTACTCAAAAAGT
GTAAGTATGACTTATGCACTTGAACTAAATCATTTTATTTGTTCATAGATTTG
TCAGATGATTTTACTGCGACGACAGAACTGTTTCTGCATAACAATGTGTTTGTATTCAATGCTATGCTTAACATGTCATCTTTGGTTCATTGCATATTCGAATTTCATTGAATGTGTTCT
TGAGCTTAAAATACCTTATAACTTTGTCAAGTGATATTGCTGTCTTAGTTTCATGCTGATGAAAGAAAGCTATTAGGAACTGTTAAATTTCTTCCTGTGCAGACATGGATGTATCTCTCT
GTTCCTTTATTACTTTATGTCAGCGAGAGAATTTTCACAGCTATTGATGAGCGCAACCATCGTGTCAATGTTATCAAG
GTCAGCAATCATAGAGCTCTCCTGCCTTCGATTCTCAAGTCC
CAGGAACATGTATAAGTGCTTATGAACTGAATACATGAGTTATTGCAGGCAATCATATACACAGGAAATGTTTTGGCGTTGTACATAAGCAAACCCCCAGGATTCAAGTATAAAAGCGGA
ATGTATATGTTTGTCAAGTGTCCAGATATTTCCAACTTCGAGTG
GTAATGCATTGCTTTACTCAACAACAGGCTAAACCAAGTCTGTTAGTTGCTAGCTGCACATTTTTATGAATTGAGC
TGATTGATTTGTCACTTGTCATAGGCATCCTTTTTCTATCACTTCCGCTCCAGGAGATGACTACTTGAGTGTCCACATACGAACCTTGGGAGACTGGACCATGGAGCTTAAGAACAGATT
CGCACAG
GTTAACAGATTATGGTGCTATGGCTAGAAGTTTATCTACTGTAACACACTACTGCTTGCTTCTTGATCTTAAATGTCTCACTTTCTGTTTCCACTTTTAAGTGCTAAGTTGAA
GAATTGCAGGTTTGTGAGCCACCAAACAAGCCAGCGGGAAGGGGCAGTCTAGTGAGGCTTCAAACCAAGGCAATCTCAGATTATGATCCCACACAAGTCAGGTGGAGCAAAGTTTCAGTG
ATCTTGTTTTGTGGCTTCAATGATGTTGTTAAATCTCATAATTTCTTTTCAATTTTACAGATTCCCGAAAATCCTCATTAAGGGACCGTATGGAGCCCCAGCTCAGAACTACAAAAAGTA
CGACATCCTTTTCCTTATCGGTCTAGGGATCGGGGCAACGCCGTTTATCAGCATTTTGAAGGACCTCCTCAACCAGATCAAGCCGAACAAGCAAAACAATGTGAGCCAAAAGTTTATAAC
TTCAAACAAGTTTAGCAGATGTAGGAGACAA
GTAGTAAACAGGATGATTTGACCACTTGCAGGATCCTGGACAAAGCATACCAGGTGCAAATAAGAAGGCACCGGAAAGAGCATACTTCT
ATTGGGTAACAAGGGAACAGGGTTCGTTTGAATGGTTCAAAGGTGTGATGGATGATATCGCAGATTACGACCATAAT
GTAAGTTCCAAAACAATGGAAAACATGCTTCATGACCACCTCG
CCTTCTTACGTTTACACTCATTCTTGTAGTAGCACATCCTCTTCTGTTTATATCATTCTCACTGTTTATTGGTCTAATGAGCTGAGCAGCATATAATAGAGATGCACAACTACTTGACTA
GTGTATATGAAGAAGGAGATGCACGGTCAGCACTCATCGCAATGGTGCAGAAGCTGCAGCATGCAAAGAATGGAGTGGATGTTGTCTCAGAAAGCCGG
GTATATGCCTCTAGTTATTATT
CCTCTGATCATTTAATTCATGTCTGGCTCATTTCCGACATACGTGCGCGCAGATAAGAACGCATTTTGCGAGGCCTAACTGGAGAAAGGTGTTCTCCCAATTGGCAAGTGCTCATCCTTC
TTCTCGAATAG
GTACTGGTTTTGATTTGCGGCCATGGAGAAATGTCAAAATGCACTTAGCTGATGAGATTGTTCTCATTCTGGCTTTTGCCTCTAATGTGGATGTTGGGCCCTTGCAGGT
GTTTTCTACTGTGGAAGTCCAACCCTTACTCAGCCGTTAAAGAAGCTTTGTCAAGAATTCAGCCTAAACTCATCGACCCGTTTCCAATTTCACAAGGAAAACTTCTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGGGACTCCTCTAAATGGATTCTGGAAAGCATCGAGGTCGACGACATGGCTGATGTGCCCTTGGACAGCTCCAACAAAAGCGGCGTTCATAGCGGCGGCCCGACTTCCAAGGTGAAC
GATGAGGCAATGCTCGCCCGGAGCTCGAGCAGCACGAGGAAGCAAGTTGGGTTTCAGGGCACTGGGCCACCGGTGTTGTCTAGGATGGGAAGGACCGAATCCGGTGCCAGGAGAGGGCTC
AAGAGCTTGAGGTTCTTGGACAGGACCATCACAGGGAAGGAGGTGGACGCTTGGAAGTCCATGGAGAAACGTTTCAACCAATTCGCAGTCGATGGGAGGATCTCGAAGGACAAGTTCGGG
ACCTGCATTG
GAATGGGAGAATCCAAGGAATTTGCGGGGGAGCTGTTTGATGCATTGGCGAGGCGTAGGAAGATACACTCGGAGAACGGGATTACTCAGGAGGAAATGAGGGCGTTTTGG
GACGATATGACCAACCAGGACATCGACTCACGCCTTCAAATCTTCTTTGACAT
GTGTGACAAAAATGGCGATGGTAAGCTCTCCGAGGAGGAGGTGAAGGAGGTAATCATATTGAGCGCT
TCAGCAAACAAGCTGTCCAATCTCAAGCAGCAAGCCGCATCCTATGCCGTGTTGATCATGGAAGAGCTCGATCCTGACCATCTTGGGTATATCGAA
ATGTGGCAACTCGAGACTCTACTG
AGGGAGATGGTGAGCTCCGAAGAAGCCAACAAGCTGGCCAAAAAAACCCACACTCTTGCAAGGACCATGATTCCGAGACAATATAGGACTCCGATCAGCAAATTTCTATCGAAAACCTTC
GAATTTCTCCAGGAGAATTGGAAGAGAGTGTGGGTCATGTCACTTTGGTTGACTCTAAATTTGATCCTTTTTGTCTGGAAGTTCCGTCAATACAAGGAGAGAGATATATTTCAAGTCATG
GGTTACTGTGTTTGTTTTGCGAAGGGCGCTGCTGAGACGCTCAAATTCAACATGGCCCTTATTCTCATCCCTGTGTGTAGGAGGACGCTTACTAAACTTAGATCAACTGCCCTAAGTAGG
ATATTTCCTTTCGACGACAATATTAATTTCCACAAGTCGATAGCACTGGCAATAGTAATCGGGACTTCAATACATATTATTATGCACCTTTCGTGTGATTTCCCAAGACTAATTTCATGT
CCTAAGCCAAAGTTTTTGAGGTACGCGGGGCCTAACTTTGATTACAAGCAGCCAAGTTACTTGGATCTAGTTGAGAGTGTTCCTGGCATTACCGGGATTATAATTACCATCTTGATGGCT
TTCTCTTTCACACTGGCCACGCATTCATTTAGAAGGAATGTCATCAAGTTAGCTTGGCCATTCCACCATCTAGCCGGGTTCAATGCCTTCTGGTACGCTCACCATTTGCTGTTCCTGGTC
TATGCTCTCTTGATAGTGCACGGCTACTTCCTGTTTCTGAGTAGGCACTGGTACTCAAAAAGT
ACATGGATGTATCTCTCTGTTCCTTTATTACTTTATGTCAGCGAGAGAATTTTCACA
GCTATTGATGAGCGCAACCATCGTGTCAATGTTATCAAG
GCAATCATATACACAGGAAATGTTTTGGCGTTGTACATAAGCAAACCCCCAGGATTCAAGTATAAAAGCGGAATGTATATG
TTTGTCAAGTGTCCAGATATTTCCAACTTCGAGTG
GCATCCTTTTTCTATCACTTCCGCTCCAGGAGATGACTACTTGAGTGTCCACATACGAACCTTGGGAGACTGGACCATGGAGCTT
AAGAACAGATTCGCACAG
GTTTGTGAGCCACCAAACAAGCCAGCGGGAAGGGGCAGTCTAGTGAGGCTTCAAACCAAGGCAATCTCAGATTATGATCCCACACAAGTCAGATTCCCGAAA
ATCCTCATTAAGGGACCGTATGGAGCCCCAGCTCAGAACTACAAAAAGTACGACATCCTTTTCCTTATCGGTCTAGGGATCGGGGCAACGCCGTTTATCAGCATTTTGAAGGACCTCCTC
AACCAGATCAAGCCGAACAAGCAAAACAATGTGAGCCAAAAGTTTATAACTTCAAACAAGTTTAGCAGATGTAGGAGACAA
GATCCTGGACAAAGCATACCAGGTGCAAATAAGAAGGCA
CCGGAAAGAGCATACTTCTATTGGGTAACAAGGGAACAGGGTTCGTTTGAATGGTTCAAAGGTGTGATGGATGATATCGCAGATTACGACCATAAT
CATATAATAGAGATGCACAACTAC
TTGACTAGTGTATATGAAGAAGGAGATGCACGGTCAGCACTCATCGCAATGGTGCAGAAGCTGCAGCATGCAAAGAATGGAGTGGATGTTGTCTCAGAAAGCCGG
ATAAGAACGCATTTT
GCGAGGCCTAACTGGAGAAAGGTGTTCTCCCAATTGGCAAGTGCTCATCCTTCTTCTCGAATAG
GTGTTTTCTACTGTGGAAGTCCAACCCTTACTCAGCCGTTAAAGAAGCTTTGTCAA
GAATTCAGCCTAAACTCATCGACCCGTTTCCAATTTCACAAGGAAAACTTCTAG

Retrieve as FASTA