Entry information : EcamPrxII01 ( EcC030650.10)
Entry ID 10596
Creation 2012-02-29 (Qiang Li)
Last sequence changes 2016-01-26 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-01-26 (Achraf Jemmat)
Peroxidase information: EcamPrxII01 ( EcC030650.10)
Name (synonym) EcamPrxII01 ( EcC030650.10)
Class Atypical 2-Cysteine peroxiredoxin (type II)    [Orthogroup: PrxII001]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamPrxII01
start..stop
S start..stop
EglPrxII01 393 2e-141 1..223 1..223
EgrPrxII01 332 2e-117 1..224 1..212
PtrtrPrxII05 308 5e-108 1..224 1..212
CclPrxII04 307 3e-107 1..224 1..226
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..672 672  
join(1..672)


exon

Literature and cross-references EcamPrxII01 ( EcC030650.10)
Protein sequence: EcamPrxII01 ( EcC030650.10)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   224
PWM (Da):   %s   23089.26  
PI (pH):   %s   9.61
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAASLSISRL LTTTSATKTA AAAAALLPRK SLSFTSLAAP RRSSLAVAVP RHPGKPLRVS TAATPTRAAI SVGDKLPDAT LSYFDPAGEL QTTTVSALTA GKKSILFAVP GAFTPTCSQK 
HLPGFVEKAG ELKAKGVDTI ACVSVNDAFV MRAWKENLGI GDEVLLLSDG NGDFTRAIGC ELDLSDKPIG LGVRSRRYAL LAEDGVVKVL NLEEGGAFTF SSAE 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron). Incorrect prediction from kazusa (3' end is missing due to the ending of contig).
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGCTT CTCTCTCCAT CTCCAGACTC CTCACCACCA CCTCCGCCAC CAAAACCGCC GCCGCCGCCG CCGCCCTTCT CCCTCGCAAA TCCCTCTCCT TCACCTCCCT CGCCGCCCCC  CGCCGCTCCT CCCTCGCCGT CGCCGTCCCC CGCCACCCCG GCAAGCCCCT CCGCGTCTCC ACCGCCGCCA CCCCGACCCG CGCCGCCATC TCCGTGGGCG ACAAGCTCCC GGACGCCACC  CTCTCCTACT TCGACCCCGC CGGCGAGCTC CAGACCACCA CCGTCTCCGC CCTCACCGCC GGGAAGAAGT CGATCCTCTT CGCCGTCCCG GGGGCCTTCA CCCCGACCTG CTCCCAGAAG  CACCTCCCCG GGTTCGTGGA GAAGGCCGGG GAGCTGAAGG CGAAGGGGGT GGACACCATC GCCTGCGTCT CGGTGAACGA CGCCTTCGTG ATGCGGGCGT GGAAGGAGAA CCTGGGGATC  GGCGACGAGG TCCTGCTGCT GTCGGACGGG AACGGGGACT TCACGAGGGC GATCGGGTGC GAGCTCGACC TGAGCGACAA GCCCATCGGG CTCGGGGTGC GGTCGCGGCG GTACGCGCTG 
CTCGCGGAGG ACGGCGTCGT GAAGGTGCTC AACCTGGAGG AAGGCGGGGC CTTCACCTTC AGCAGTGCCG AG 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCAGCTT CTCTCTCCAT CTCCAGACTC CTCACCACCA CCTCCGCCAC CAAAACCGCC GCCGCCGCCG CCGCCCTTCT CCCTCGCAAA TCCCTCTCCT TCACCTCCCT CGCCGCCCCC  CGCCGCTCCT CCCTCGCCGT CGCCGTCCCC CGCCACCCCG GCAAGCCCCT CCGCGTCTCC ACCGCCGCCA CCCCGACCCG CGCCGCCATC TCCGTGGGCG ACAAGCTCCC GGACGCCACC  CTCTCCTACT TCGACCCCGC CGGCGAGCTC CAGACCACCA CCGTCTCCGC CCTCACCGCC GGGAAGAAGT CGATCCTCTT CGCCGTCCCG GGGGCCTTCA CCCCGACCTG CTCCCAGAAG  CACCTCCCCG GGTTCGTGGA GAAGGCCGGG GAGCTGAAGG CGAAGGGGGT GGACACCATC GCCTGCGTCT CGGTGAACGA CGCCTTCGTG ATGCGGGCGT GGAAGGAGAA CCTGGGGATC  GGCGACGAGG TCCTGCTGCT GTCGGACGGG AACGGGGACT TCACGAGGGC GATCGGGTGC GAGCTCGACC TGAGCGACAA GCCCATCGGG CTCGGGGTGC GGTCGCGGCG GTACGCGCTG 
CTCGCGGAGG ACGGCGTCGT GAAGGTGCTC AACCTGGAGG AAGGCGGGGC CTTCACCTTC AGCAGTGCCG AG 

Retrieve as FASTA